G1360998


Basic Information

Item Value
gene id G1360998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 29408548 ~ 29408806 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1555467
gtgatagtctcagaggtccgttaaaggcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccaagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatcgaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcaga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1555467 True 259 lncRNA 0.44 1 29408548 29408806

Neighbor

gene id symbol gene type direction distance location
nrg3b LOC106579414 coding upstream 55088 28924817 ~ 29353460 (+)
si:ch211-214e3.5 LOC106579413 coding upstream 550747 28833364 ~ 28857801 (+)
LOC110492866 LOC106521360 coding upstream 800647 28579369 ~ 28607901 (+)
nif3l1 nif3l1 coding upstream 1120740 28278657 ~ 28287808 (+)
cabp5a LOC106579440 coding upstream 1142526 28260283 ~ 28266022 (+)
LOC110491795 LOC106579416 coding downstream 15535 29424341 ~ 29480114 (+)
irf3 irf-3 coding downstream 72838 29481644 ~ 29492902 (+)
LOC110491796 NA coding downstream 94603 29503409 ~ 29511609 (+)
LOC110491797 LOC106579418 coding downstream 125236 29534042 ~ 29629011 (+)
LOC110491799 LOC106578370 coding downstream 305472 29714278 ~ 29727319 (+)
G1360978 NA non-coding upstream 18950 29389311 ~ 29389598 (+)
G1360967 NA non-coding upstream 26706 29381638 ~ 29381842 (+)
G1360950 NA non-coding upstream 40465 29367836 ~ 29368083 (+)
G1360336 NA non-coding upstream 388952 29005353 ~ 29019596 (+)
G1360251 NA non-coding upstream 477619 28884825 ~ 28930929 (+)
G1361033 NA non-coding downstream 106646 29515452 ~ 29515694 (+)
G1361046 NA non-coding downstream 220342 29629148 ~ 29650224 (+)
G1361114 NA non-coding downstream 247655 29656461 ~ 29656668 (+)
G1361155 NA non-coding downstream 331945 29740751 ~ 29741079 (+)
G1361517 NA non-coding downstream 416707 29825513 ~ 29825718 (+)
G1358698 kif22 other upstream 1361158 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 1462707 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 1831456 27561141 ~ 27595350 (+)
G1358292 NA other upstream 2076273 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 3093747 26283071 ~ 26314809 (+)
G1361207 NA other downstream 393848 29802654 ~ 29804368 (+)
G1361671 NA other downstream 534635 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 1294841 30700999 ~ 30704172 (+)
G1362902 fgfr2 other downstream 1545803 30954609 ~ 30955975 (+)
G1363401 NA other downstream 1825687 31234493 ~ 31235386 (+)

Expression


Co-expression Network