G1361517


Basic Information

Item Value
gene id G1361517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 29825513 ~ 29825718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1556059
cagatgaagtgaggaagaacagatatcactaaaGTTCTGTCTAGCAATGTAGATGTATTGGCTGTTCAGAGGTGTAAGGAGGAGGCTCAGTATAGGAGGAAGGATTAAATACTAGTGCTTGTGTGAATATATTTTTGTCTTATGCAGCTGTATGACCCAGCGGGTGAATAAACTTTTTGCGTAACCCTGGTTCTCTGTTAATAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1556059 True 206 lncRNA 0.40 1 29825513 29825718

Neighbor

gene id symbol gene type direction distance location
LOC110491800 LOC106579437 coding upstream 46372 29776440 ~ 29779141 (+)
LOC110491799 LOC106578370 coding upstream 98194 29714278 ~ 29727319 (+)
LOC110491797 LOC106579418 coding upstream 196502 29534042 ~ 29629011 (+)
LOC110491796 NA coding upstream 313904 29503409 ~ 29511609 (+)
irf3 irf-3 coding upstream 332611 29481644 ~ 29492902 (+)
LOC110491801 if3ei coding downstream 81574 29907292 ~ 29925164 (+)
LOC110491802 cssa19h10orf105 coding downstream 316711 30142429 ~ 30144341 (+)
LOC110491805 LOC106579442 coding downstream 773676 30599394 ~ 30658325 (+)
LOC110492869 LOC106599969 coding downstream 875281 30700999 ~ 30704172 (+)
LOC110492895 NA coding downstream 882305 30708023 ~ 30708936 (+)
G1361155 NA non-coding upstream 84434 29740751 ~ 29741079 (+)
G1361114 NA non-coding upstream 168845 29656461 ~ 29656668 (+)
G1361046 NA non-coding upstream 175289 29629148 ~ 29650224 (+)
G1361033 NA non-coding upstream 309819 29515452 ~ 29515694 (+)
G1360998 NA non-coding upstream 416707 29408548 ~ 29408806 (+)
G1361524 NA non-coding downstream 2852 29828570 ~ 29828796 (+)
G1361529 NA non-coding downstream 7242 29832960 ~ 29833175 (+)
G1361592 NA non-coding downstream 114436 29940154 ~ 29940377 (+)
G1361667 NA non-coding downstream 115405 29941123 ~ 29941688 (+)
G1361684 NA non-coding downstream 128792 29954510 ~ 29954952 (+)
G1361207 NA other upstream 21145 29802654 ~ 29804368 (+)
G1358698 kif22 other upstream 1778123 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 1879672 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 2248421 27561141 ~ 27595350 (+)
G1358292 NA other upstream 2493238 27329311 ~ 27332275 (+)
G1361671 NA other downstream 117723 29943441 ~ 29943756 (+)
G1362902 fgfr2 other downstream 1128891 30954609 ~ 30955975 (+)
G1363401 NA other downstream 1408775 31234493 ~ 31235386 (+)
G1364768 NA other downstream 2575716 32401434 ~ 32401808 (+)

Expression


Co-expression Network