G1361524


Basic Information

Item Value
gene id G1361524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 29828570 ~ 29828796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1556066
aactgggagtctcgtgagtgaaaacatccaaagcttatcaaaggtaaacgatttaatttgattgcttttctgattttcgtgaccaagttacctgctgctagctgggcataatgctatgctaggctatcgataaacttacacaaatacttgtcttgctttggctgtaaagcatattttgaaaatctgagatgacagggtgattaacaaaaggctaagctgtgtttcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1556066 True 227 lncRNA 0.38 1 29828570 29828796

Neighbor

gene id symbol gene type direction distance location
LOC110491800 LOC106579437 coding upstream 49429 29776440 ~ 29779141 (+)
LOC110491799 LOC106578370 coding upstream 101251 29714278 ~ 29727319 (+)
LOC110491797 LOC106579418 coding upstream 199559 29534042 ~ 29629011 (+)
LOC110491796 NA coding upstream 316961 29503409 ~ 29511609 (+)
irf3 irf-3 coding upstream 335668 29481644 ~ 29492902 (+)
LOC110491801 if3ei coding downstream 78496 29907292 ~ 29925164 (+)
LOC110491802 cssa19h10orf105 coding downstream 313633 30142429 ~ 30144341 (+)
LOC110491805 LOC106579442 coding downstream 770598 30599394 ~ 30658325 (+)
LOC110492869 LOC106599969 coding downstream 872203 30700999 ~ 30704172 (+)
LOC110492895 NA coding downstream 879227 30708023 ~ 30708936 (+)
G1361517 NA non-coding upstream 2852 29825513 ~ 29825718 (+)
G1361155 NA non-coding upstream 87491 29740751 ~ 29741079 (+)
G1361114 NA non-coding upstream 171902 29656461 ~ 29656668 (+)
G1361046 NA non-coding upstream 178346 29629148 ~ 29650224 (+)
G1361033 NA non-coding upstream 312876 29515452 ~ 29515694 (+)
G1361529 NA non-coding downstream 4164 29832960 ~ 29833175 (+)
G1361592 NA non-coding downstream 111358 29940154 ~ 29940377 (+)
G1361667 NA non-coding downstream 112327 29941123 ~ 29941688 (+)
G1361684 NA non-coding downstream 125714 29954510 ~ 29954952 (+)
G1361685 LOC106579432 non-coding downstream 126783 29955579 ~ 29956671 (+)
G1361207 NA other upstream 24202 29802654 ~ 29804368 (+)
G1358698 kif22 other upstream 1781180 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 1882729 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 2251478 27561141 ~ 27595350 (+)
G1358292 NA other upstream 2496295 27329311 ~ 27332275 (+)
G1361671 NA other downstream 114645 29943441 ~ 29943756 (+)
G1362902 fgfr2 other downstream 1125813 30954609 ~ 30955975 (+)
G1363401 NA other downstream 1405697 31234493 ~ 31235386 (+)
G1364768 NA other downstream 2572638 32401434 ~ 32401808 (+)

Expression


Co-expression Network