G1361529


Basic Information

Item Value
gene id G1361529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 29832960 ~ 29833175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1556071
ATAGACATGTTTTCTATTCAAGTGAAAGTGCATCAAAGCCTTAAGTCTCTACATCTACTTCGTGTTGTTAACCATACCTATTTAATGACACCTAAGAGTAGAGGTTGTCCGATATACATTCAGCATGTATTGGCAATGCAAATCCCTTTTTACGTGGAGCTGGCCGAAAAAGCTATTAGTAAATAGGTGTCTTTACTCAGTATTTCTTACTGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1556071 True 216 lncRNA 0.37 1 29832960 29833175

Neighbor

gene id symbol gene type direction distance location
LOC110491800 LOC106579437 coding upstream 53819 29776440 ~ 29779141 (+)
LOC110491799 LOC106578370 coding upstream 105641 29714278 ~ 29727319 (+)
LOC110491797 LOC106579418 coding upstream 203949 29534042 ~ 29629011 (+)
LOC110491796 NA coding upstream 321351 29503409 ~ 29511609 (+)
irf3 irf-3 coding upstream 340058 29481644 ~ 29492902 (+)
LOC110491801 if3ei coding downstream 74117 29907292 ~ 29925164 (+)
LOC110491802 cssa19h10orf105 coding downstream 309254 30142429 ~ 30144341 (+)
LOC110491805 LOC106579442 coding downstream 766219 30599394 ~ 30658325 (+)
LOC110492869 LOC106599969 coding downstream 867824 30700999 ~ 30704172 (+)
LOC110492895 NA coding downstream 874848 30708023 ~ 30708936 (+)
G1361524 NA non-coding upstream 4164 29828570 ~ 29828796 (+)
G1361517 NA non-coding upstream 7242 29825513 ~ 29825718 (+)
G1361155 NA non-coding upstream 91881 29740751 ~ 29741079 (+)
G1361114 NA non-coding upstream 176292 29656461 ~ 29656668 (+)
G1361046 NA non-coding upstream 182736 29629148 ~ 29650224 (+)
G1361592 NA non-coding downstream 106979 29940154 ~ 29940377 (+)
G1361667 NA non-coding downstream 107948 29941123 ~ 29941688 (+)
G1361684 NA non-coding downstream 121335 29954510 ~ 29954952 (+)
G1361685 LOC106579432 non-coding downstream 122404 29955579 ~ 29956671 (+)
G1361687 NA non-coding downstream 124261 29957436 ~ 29957661 (+)
G1361207 NA other upstream 28592 29802654 ~ 29804368 (+)
G1358698 kif22 other upstream 1785570 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 1887119 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 2255868 27561141 ~ 27595350 (+)
G1358292 NA other upstream 2500685 27329311 ~ 27332275 (+)
G1361671 NA other downstream 110266 29943441 ~ 29943756 (+)
G1362902 fgfr2 other downstream 1121434 30954609 ~ 30955975 (+)
G1363401 NA other downstream 1401318 31234493 ~ 31235386 (+)
G1364768 NA other downstream 2568259 32401434 ~ 32401808 (+)

Expression


Co-expression Network