G1363186


Basic Information

Item Value
gene id G1363186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 30965578 ~ 30972721 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1557816
gggttagtcAAATGTCAGATAAATGTGTGTACACTGTATATattgcgtgcctgtgtgtgtttttcccTGCTGAGTTATTCAACAATCTACTCTTATGAATATGGGTCTGTGTCCCAGACTGAgacccgtctctctctgtgtgtgtgtgtgtgtgtgtgatggctgtgacagtcatggaattttggatgatggTTATTGCTCAGCCAAATGATCTTGGTCACTGTTATAACCatacaaatgtatatattttttaaagaactacattttctcctctcctccgctcctgactgcatgtgctgccatagaaatagaatatgATATTCATTACgtttctacactcttagaaaaaaaggttatcTAGAagctaaaagggttctttggctgtccccataggagaacccttcgaAGAGCACTTTTTAGTTCCaagtagaaccattttggttctatgtagaacacttttgggttccatgtaaaacccttacagaggggttctacatggaacccaaaagggttctactatggggacagccaaagaacccttttggaacccctttttctaagagtgtatgtgcTGCTGGAGGGAGGGGGCATTGCCTAGGCAACCAAAGACCCGTTTGCTACAACAATTTGATTGTTTCACGTTTGCTATATACCTTACTTGTTTCCGCAAGGAGCAACAACGTTTCATCACGTTGTTAAGTGTCCATGTTACTACCGAAACAGACTCAACTGCATGAATGTCCAGCAGCAACACCTACAGTCAGCTGTTCATTccacaataaataaatatatacactgagtgtacaagacattaggaacaccttcctaatattgagttgcacccctttttgccctcagaacagtctcaattcatcagggcatggactctagtTGGCTGGAtcttctttgggtggtggaccattcttgatacacatgggaaactgttgagcgtgaaacacAGCcgggttgcagttcttgacacactcaaaccagtgcgcctggcacctactaccataccttgttcaaagtgacttaaatatgttgtcttgccctttcaccttctgaatggcacacatacacaatccatgtgtcaattgtttcaaggcttaaaaatcctcctttaacatctcctccccttcatctacgctgattgaagtggatttaacaggtgacatcaataagggatcgttgctttcacctggattaaaCTGGTTAgtcatgtcatggaaagagcatgtgttcctaatattttgactggtactgtatatacagtaccagtcaaacatttggacacacctactcattcaagggtttttctttacattgtagaatagtagtgaagacatcacaactatgaaataacacaaagaatcatgtagtaacctaaaaaaCCCTGAaagagtatacagtgccttgcgaaggtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacatgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1557816 True 1746 lncRNA 0.41 2 30965578 30972721

Neighbor

gene id symbol gene type direction distance location
LOC110492868 LOC106579432 coding downstream 421706 29955527 ~ 30543872 (-)
LOC110492894 NA coding downstream 1091996 29855177 ~ 29873630 (-)
LOC110491798 LOC106578369 coding downstream 1262985 29674817 ~ 29702593 (-)
LOC110491794 NA coding downstream 1541925 29412470 ~ 29423653 (-)
afap1l2 afap1l2 coding downstream 2198576 28626132 ~ 28767002 (-)
LOC110492870 ate1 coding upstream 157396 31130117 ~ 31182991 (-)
LOC110491809 p5cs coding upstream 297888 31270609 ~ 31285633 (-)
LOC110491810 LOC106579441 coding upstream 332362 31305083 ~ 31307541 (-)
LOC110491807 LOC106576884 coding upstream 341373 31314091 ~ 31462245 (-)
LOC110491813 LOC106579422 coding upstream 502070 31474791 ~ 31496300 (-)
G1362759 NA non-coding downstream 209800 30755478 ~ 30755778 (-)
G1362694 NA non-coding downstream 255251 30709871 ~ 30710327 (-)
G1362693 NA non-coding downstream 255905 30708963 ~ 30709673 (-)
G1362689 NA non-coding downstream 257892 30707448 ~ 30707686 (-)
G1362686 NA non-coding downstream 259042 30706337 ~ 30706536 (-)
G1363747 NA non-coding upstream 325611 31298332 ~ 31298540 (-)
G1363753 NA non-coding upstream 331048 31303769 ~ 31304637 (-)
G1363757 NA non-coding upstream 340523 31313244 ~ 31313454 (-)
G1363777 NA non-coding upstream 373254 31345975 ~ 31346383 (-)
G1361619 NA other downstream 1040424 29923871 ~ 29925154 (-)
G1361290 NA other downstream 1468023 29497113 ~ 29497555 (-)
taok2b LOC106579406 other downstream 2784638 28177715 ~ 28237354 (-)
G1359763 NA other downstream 2801351 28163463 ~ 28164227 (-)
G1359412 NA other downstream 3437441 27527163 ~ 27528137 (-)
G1363836 NA other upstream 666716 31639437 ~ 31650697 (-)
G1364105 NA other upstream 913028 31885749 ~ 31886112 (-)
G1364348 NA other upstream 1046073 32018794 ~ 32019498 (-)
G1365099 NA other upstream 1661744 32634465 ~ 32635511 (-)
G1366703 NA other upstream 2711290 33684011 ~ 33684473 (-)

Expression


Co-expression Network