G1363000


Basic Information

Item Value
gene id G1363000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 31104302 ~ 31108723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1557623
gttcaaatcaaatcaaatttatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcccaaaaccccaaacagcaagcaatgcagctgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1557623 True 290 lncRNA 0.47 2 31104302 31108723

Neighbor

gene id symbol gene type direction distance location
LOC110491812 NA coding upstream 29554 31017575 ~ 31075269 (+)
LOC110492895 NA coding upstream 395366 30708023 ~ 30708936 (+)
LOC110492869 LOC106599969 coding upstream 400130 30700999 ~ 30704172 (+)
LOC110491805 LOC106579442 coding upstream 445977 30599394 ~ 30658325 (+)
LOC110491802 cssa19h10orf105 coding upstream 959961 30142429 ~ 30144341 (+)
LOC110491811 LOC106579425 coding downstream 154436 31263159 ~ 31271221 (+)
cpn1 cpn1 coding downstream 416858 31525581 ~ 31682463 (+)
LOC110491816 NA coding downstream 486563 31595286 ~ 31597988 (+)
LOC110491817 NA coding downstream 588082 31696805 ~ 31701389 (+)
LOC118939602 NA coding downstream 686550 31795273 ~ 31795389 (+)
G1362938 NA non-coding upstream 72288 31013112 ~ 31032014 (+)
G1362713 NA non-coding upstream 379424 30724573 ~ 30724878 (+)
G1362708 NA non-coding upstream 386079 30717940 ~ 30718223 (+)
G1362707 NA non-coding upstream 387067 30716955 ~ 30717235 (+)
G1363413 NA non-coding downstream 136911 31245634 ~ 31245931 (+)
G1363436 NA non-coding downstream 186385 31295108 ~ 31295395 (+)
G1363437 NA non-coding downstream 187674 31296397 ~ 31296657 (+)
G1363449 NA non-coding downstream 204213 31312936 ~ 31313148 (+)
G1362902 fgfr2 other upstream 148327 30954609 ~ 30955975 (+)
G1361671 NA other upstream 1160546 29943441 ~ 29943756 (+)
G1361207 NA other upstream 1299934 29802654 ~ 29804368 (+)
G1358698 kif22 other upstream 3056912 28046682 ~ 28047390 (+)
G1363401 NA other downstream 125770 31234493 ~ 31235386 (+)
G1364768 NA other downstream 1292711 32401434 ~ 32401808 (+)
G1364907 NA other downstream 1498067 32606790 ~ 32607133 (+)
G1364937 LOC106613263 other downstream 1560973 32669696 ~ 32670131 (+)
G1366438 NA other downstream 2604510 33713233 ~ 33713620 (+)

Expression


Co-expression Network