XLOC_032744 (pimr17)


Basic Information

Item Value
gene id XLOC_032744
gene name pimr17
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 17110835 ~ 17112151 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063729
aggttggaggagattgtccatgtcccacatgggtgaagaaagaggagaagatacacgggacggcaccactgagcttcctggttttttggctcctctgccttcacatttggctgattctgcatccacagaccagaggaacagcaagaggaaaaggcaGAGCAGCAACCAGCAAACACTGTCCACCTCGTCCAGCAGACcagccaaacgctctcgcagagacttgtacctgaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtttgtgtcgaaggaccggaccccagagcgactgaaagttgatggtcagggtcggctgccgctggaggtggcattgatgacccgtgtcacatcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccgtcccagacgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtcttgcaaagaaagtgctggtgcagctgattgcggccctaaaacactgcgagagccgcggcgtcctgcaccgggacgtcaaaccagaaaacctgctgatctccacagagtcccaggacatcaagctgctggacttcggctgtggagatgtgctgaagcgctcggcctacaaatactttgcaggcactcctgcatacgctcctcccga

Function

symbol description
pimr17 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116090

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063729 True 750 mRNA 0.57 6 17110835 17112151

Neighbor

gene id symbol gene type direction distance location
XLOC_032743 BX511311.1 coding downstream 9480 17099672 ~ 17101355 (-)
XLOC_032742 BX511311.4 coding downstream 56108 17054631 ~ 17054727 (-)
XLOC_032741 pimr45 coding downstream 58719 17050800 ~ 17052116 (-)
XLOC_032740 BX649628.1 coding downstream 76542 17032975 ~ 17034293 (-)
XLOC_032739 BX649628.4 coding downstream 127149 16983589 ~ 16983686 (-)
XLOC_032745 BX511311.7 coding upstream 2507 17114658 ~ 17114755 (-)
XLOC_032746 BX511311.3 coding upstream 7128 17119279 ~ 17217521 (-)
XLOC_032747 NA coding upstream 42752 17154903 ~ 17155299 (-)
XLOC_032748 NA coding upstream 44463 17156614 ~ 17157202 (-)
XLOC_032749 pimr19 coding upstream 66170 17178321 ~ 17179637 (-)
XLOC_032737 BX649628.2 non-coding downstream 160243 16950495 ~ 16950592 (-)
XLOC_032750 BX511311.10 non-coding upstream 69987 17182138 ~ 17182235 (-)

Expression


Co-expression Network