G1363706


Basic Information

Item Value
gene id G1363706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 31805393 ~ 31805927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1558358
CAATAGAACCTTTTAATCATCTGATGTCTTTGATTTTAAATTTAACCATGAAATTAAAGGAAATTGCATTTTTAGCAAAACAGAAAAGTAGGGGGTTATTTTAAGAAGTAAGGAGAGGGAATTAGAAGGGGAGAAGTGTACGAGGCACTTTAAGAAAATAGTTAGAAAGGGTAGGACAATGACAGGATTAAAAATAAAGATGGGTTTTAAAAACAGAGGGAATAAAATAAGTAGTCGAGGATGCTTATGGGGAACTGTTTGGAGTAAAATATTTGTGTGAGGAAACCATGAGGGACATTTTAACATACATTGACAGGACCTTACTCAACACCTGACAATGACAGAAATTGATTAAGGACTGAAACATTTTAAGAGGGGTAAGTCACCAGGGGAGGACAGCCTCCCCTTGGAGTTTTATCTGAACTTTTGGGATGTCTTAGCCGACAAACTTCTGTCTTTACTGACTTTGAACAACTTGACAAACTACCTGACAGTTTTAGAGTAGGGATTGTGACTCTTTTACACAAGACAAACT

Function

NR:

description
reverse transcriptase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1558358 True 535 lncRNA 0.36 1 31805393 31805927

Neighbor

gene id symbol gene type direction distance location
LOC118939615 NA coding upstream 4768 31800425 ~ 31800625 (+)
LOC118939602 NA coding upstream 10004 31795273 ~ 31795389 (+)
LOC110491817 NA coding upstream 104004 31696805 ~ 31701389 (+)
cpn1 cpn1 coding upstream 122930 31525581 ~ 31682463 (+)
LOC110491816 NA coding upstream 207405 31595286 ~ 31597988 (+)
znf362b LOC106572154 coding downstream 194570 32000497 ~ 32009436 (+)
LOC118939457 NA coding downstream 377986 32183913 ~ 32202153 (+)
LOC110491824 LOC106572151 coding downstream 398548 32204475 ~ 32223926 (+)
LOC110491827 LOC106567381 coding downstream 624620 32430547 ~ 32432224 (+)
phactr3a LOC106567379 coding downstream 675695 32481622 ~ 32541851 (+)
G1363693 NA non-coding upstream 20496 31784693 ~ 31784897 (+)
G1363646 NA non-coding upstream 76160 31729022 ~ 31729233 (+)
G1363632 NA non-coding upstream 100867 31704254 ~ 31704526 (+)
G1363566 NA non-coding upstream 331471 31473557 ~ 31473922 (+)
G1363449 NA non-coding upstream 492245 31312936 ~ 31313148 (+)
G1364071 NA non-coding downstream 39438 31845365 ~ 31880301 (+)
G1364076 NA non-coding downstream 42428 31848355 ~ 31853286 (+)
G1364077 NA non-coding downstream 42782 31848709 ~ 31855197 (+)
G1364072 NA non-coding downstream 60269 31866196 ~ 31867824 (+)
G1364085 NA non-coding downstream 74476 31880403 ~ 31881454 (+)
G1363401 NA other upstream 570007 31234493 ~ 31235386 (+)
G1362902 fgfr2 other upstream 849418 30954609 ~ 30955975 (+)
LOC110492869 LOC106599969 other upstream 1101285 30700999 ~ 30704172 (+)
G1361671 NA other upstream 1861637 29943441 ~ 29943756 (+)
G1361207 NA other upstream 2001025 29802654 ~ 29804368 (+)
G1364768 NA other downstream 595507 32401434 ~ 32401808 (+)
G1364907 NA other downstream 800863 32606790 ~ 32607133 (+)
G1364937 LOC106613263 other downstream 863769 32669696 ~ 32670131 (+)
G1366438 NA other downstream 1907306 33713233 ~ 33713620 (+)
LOC110491848 morn1 other downstream 2311554 34073929 ~ 34154670 (+)

Expression


Co-expression Network