G1364085


Basic Information

Item Value
gene id G1364085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 31880403 ~ 31881454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1558800
gagagaacaagagaaagagagagaaagagagagaaagagagagagagagagaaagagaaagagaaagaaagagagagagagagagagagaaagagagagaaagaaagcgagagaacaagagaaagagaaagaaagagaaagaaagagagagaaagagagagagagagaaagagaaagagagagagagaaagagagagaaagaaagcgagagaacaagagaaagagaaagaaagagagaaatagagagaaagaaagagagagatattgagtaATAACCAATGCCAATgactgcaacctggtctcagggcAACTTGTAGGATTTGGTATGTAAATGTGTTTACCTCAGTTTAGTGCGATACATTACATTACTCCGgagagttccggagttccaaattgatcagctgctgaaaaatgagctcctgtatatattgagatttaaatggttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1558800 True 446 lncRNA 0.39 2 31880403 31881454

Neighbor

gene id symbol gene type direction distance location
LOC118939615 NA coding upstream 79778 31800425 ~ 31800625 (+)
LOC118939602 NA coding upstream 85014 31795273 ~ 31795389 (+)
LOC110491817 NA coding upstream 179014 31696805 ~ 31701389 (+)
cpn1 cpn1 coding upstream 197940 31525581 ~ 31682463 (+)
znf362b LOC106572154 coding downstream 119043 32000497 ~ 32009436 (+)
LOC118939457 NA coding downstream 302459 32183913 ~ 32202153 (+)
LOC110491824 LOC106572151 coding downstream 323021 32204475 ~ 32223926 (+)
LOC110491827 LOC106567381 coding downstream 549093 32430547 ~ 32432224 (+)
phactr3a LOC106567379 coding downstream 600168 32481622 ~ 32541851 (+)
G1364071 NA non-coding upstream 102 31845365 ~ 31880301 (+)
G1364072 NA non-coding upstream 12579 31866196 ~ 31867824 (+)
G1364077 NA non-coding upstream 25206 31848709 ~ 31855197 (+)
G1364076 NA non-coding upstream 27117 31848355 ~ 31853286 (+)
G1363706 NA non-coding upstream 74476 31805393 ~ 31805927 (+)
G1364102 NA non-coding downstream 2373 31883827 ~ 31884055 (+)
G1364108 NA non-coding downstream 6804 31888258 ~ 31894816 (+)
G1364110 NA non-coding downstream 20042 31901496 ~ 31912216 (+)
G1364135 NA non-coding downstream 54348 31935802 ~ 31936033 (+)
G1364137 NA non-coding downstream 55988 31937442 ~ 31937661 (+)
G1363401 NA other upstream 645017 31234493 ~ 31235386 (+)
G1362902 fgfr2 other upstream 924428 30954609 ~ 30955975 (+)
LOC110492869 LOC106599969 other upstream 1176295 30700999 ~ 30704172 (+)
G1361671 NA other upstream 1936647 29943441 ~ 29943756 (+)
G1361207 NA other upstream 2076035 29802654 ~ 29804368 (+)
G1364768 NA other downstream 519980 32401434 ~ 32401808 (+)
G1364907 NA other downstream 725336 32606790 ~ 32607133 (+)
G1364937 LOC106613263 other downstream 788242 32669696 ~ 32670131 (+)
G1366438 NA other downstream 1831779 33713233 ~ 33713620 (+)
LOC110491848 morn1 other downstream 2236027 34073929 ~ 34154670 (+)

Expression


Co-expression Network