XLOC_032747



Basic Information


Item Value
gene id XLOC_032747
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 17154903 ~ 17155299 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00065119
AGCAGAAGTAGAAGACTCACAAGGAGAACGGTGGAGATATACTTGAAAATCTGGAGCTCAGGAagcaggtagaactgcttgaacagactaaacaatggagtttgtttCCAAAGAAATGTATTGCGATTAAAGACccgatatctttctctttgacaggttggcatggagcatgtggagaaacaGCGAACCACACATCAGTATTGACAAGTACATCGTAATAAATTAGGTACAGACttacatttttagttgaatcaaattaacttaataaaacatttttaaattatatactttaatttgtaaagactAAGTGATGATCGGTTATTTCCTTCAGATACAGTAAATAGTTAGATAGATGTCTTGTCTGCCAcaggtgtttctttttcaggtaatgggCACA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00065119 True 397 lncRNA 0.36 1 17154903 17155299

Neighbor


gene id symbol gene type direction distance location
XLOC_032745 BX511311.7 coding downstream 40148 17114658 ~ 17114755 (-)
XLOC_032744 pimr17 coding downstream 42752 17110835 ~ 17112151 (-)
XLOC_032743 BX511311.1 coding downstream 53548 17099672 ~ 17101355 (-)
XLOC_032742 BX511311.4 coding downstream 100176 17054631 ~ 17054727 (-)
XLOC_032741 pimr45 coding downstream 102787 17050800 ~ 17052116 (-)
XLOC_032748 NA coding upstream 1315 17156614 ~ 17157202 (-)
XLOC_032749 pimr19 coding upstream 23022 17178321 ~ 17179637 (-)
XLOC_032750 BX511311.10 coding upstream 26839 17182138 ~ 17182235 (-)
XLOC_032751 NA coding upstream 44345 17199644 ~ 17206028 (-)
XLOC_032752 BX511311.9 coding upstream 53462 17208761 ~ 17208858 (-)
XLOC_032740 BX649628.1 non-coding downstream 120610 17032975 ~ 17034293 (-)
XLOC_032739 BX649628.4 non-coding downstream 171217 16983589 ~ 16983686 (-)
XLOC_032754 BX511311.6 non-coding upstream 113363 17268662 ~ 17268759 (-)

Expression



Co-expression Network