Gene
RNA
| Item | Value |
|---|---|
| gene id | G1364341 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 32054609 ~ 32056554 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1559106 | True | 1946 | lncRNA | 0.36 | 1 | 32054609 | 32056554 |
32,052,400
32,052,800
32,053,200
32,053,600
32,054,000
32,054,400
32,054,800
32,055,200
32,055,600
32,056,000
32,056,400
32,056,800
32,057,200
32,057,600
32,058,000
32,058,400
32,058,800
32,059,200
32,059,600
32,060,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491820 | LOC106567387 | coding | downstream | 64813 | 31966722 ~ 31989796 (-) |
| ttc34 | ttc34 | coding | downstream | 96607 | 31950519 ~ 31958002 (-) |
| si:ch211-28p3.4 | LOC106579421 | coding | downstream | 325666 | 31712301 ~ 31728943 (-) |
| LOC110491813 | LOC106579422 | coding | downstream | 558309 | 31474791 ~ 31496300 (-) |
| LOC110491807 | LOC106576884 | coding | downstream | 592364 | 31314091 ~ 31462245 (-) |
| LOC110491822 | LOC106567384 | coding | upstream | 394 | 32056948 ~ 32096133 (-) |
| LOC110491823 | NA | coding | upstream | 25153 | 32081707 ~ 32086786 (-) |
| LOC110491825 | LOC100380856 | coding | upstream | 173733 | 32230287 ~ 32350853 (-) |
| pigt | LOC106567380 | coding | upstream | 379673 | 32436227 ~ 32466311 (-) |
| LOC110491830 | LOC106567378 | coding | upstream | 562194 | 32618748 ~ 32628980 (-) |
| G1364366 | NA | non-coding | downstream | 9516 | 32044591 ~ 32045093 (-) |
| G1364358 | NA | non-coding | downstream | 21919 | 32032351 ~ 32032690 (-) |
| G1364357 | NA | non-coding | downstream | 22379 | 32031894 ~ 32032230 (-) |
| G1364347 | LOC106581475 | non-coding | downstream | 36962 | 32017413 ~ 32017647 (-) |
| G1364313 | NA | non-coding | downstream | 108053 | 31946321 ~ 31946556 (-) |
| G1364424 | NA | non-coding | upstream | 82584 | 32139138 ~ 32191970 (-) |
| G1364465 | NA | non-coding | upstream | 139868 | 32196422 ~ 32196717 (-) |
| G1364475 | NA | non-coding | upstream | 145580 | 32202134 ~ 32202363 (-) |
| G1364504 | NA | non-coding | upstream | 165277 | 32221831 ~ 32223847 (-) |
| G1364736 | NA | non-coding | upstream | 324668 | 32381222 ~ 32381591 (-) |
| G1364348 | NA | other | downstream | 35111 | 32018794 ~ 32019498 (-) |
| G1364105 | NA | other | downstream | 168497 | 31885749 ~ 31886112 (-) |
| G1363836 | NA | other | downstream | 403912 | 31639437 ~ 31650697 (-) |
| G1361619 | NA | other | downstream | 2129455 | 29923871 ~ 29925154 (-) |
| G1361290 | NA | other | downstream | 2557054 | 29497113 ~ 29497555 (-) |
| G1365099 | NA | other | upstream | 577911 | 32634465 ~ 32635511 (-) |
| G1366703 | NA | other | upstream | 1627457 | 33684011 ~ 33684473 (-) |
| G1366756 | NA | other | upstream | 1690846 | 33747400 ~ 33751407 (-) |
| LOC110491043 | NA | other | upstream | 1806952 | 33863087 ~ 33870055 (-) |
| LOC110491862 | tnfrsf6b | other | upstream | 3021547 | 35077807 ~ 35079706 (-) |
