G1366428 (LOC106569561)


Basic Information

Item Value
gene id G1366428
gene name LOC106569561
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 33692769 ~ 33701675 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1561304
GAATGACCAGAATGTATTGGTGCCCTCTGGCGGATTTGGGTAGTGGGCCCACTAAATCCATCGCTATCCTCTCAAATGGCGTTTTGATTATGGGGAGTGGCACTAACGGGCTTCTAACAGCTGGTCGGGGAGCTGTTAACTGGCACTCCGGGCACACAATGCCGAGCCACTTCAGCTTGAATTCCTGGCCAGTAAAACCTCCTTACAATCCGGTCTCGGGTTTTATCGATACCAAGGTGTCCACCCAGAATGTGCCCATGAGCTAGATCCAGTACTGTCCTCCGGTACCGAGTGGGAACCAACAACTGTTCCACCACATCAACCCCTATTTTCGAGACTCTGTACACCAAACCCTTTTTCATGATGAAGTGAGGAAAACTATTAGGCATCATCCCAACATTTATGGGAGTACCATCTACGACCTGCACATCTGCTCTGGCTTGCTGCAGGGTTGGATCCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1561304 True 462 lncRNA 0.51 2 33692769 33701675

Neighbor

gene id symbol gene type direction distance location
anp anp coding upstream 51563 33639604 ~ 33641206 (+)
nppb nppb coding upstream 56195 33635561 ~ 33636574 (+)
vnp vnp coding upstream 58861 33632256 ~ 33633908 (+)
nppal LOC106567368 coding upstream 64980 33626677 ~ 33627789 (+)
LOC110491840 LOC106567458 coding upstream 93905 33579839 ~ 33598864 (+)
LOC110491842 mthfr coding downstream 19590 33721265 ~ 33747883 (+)
LOC110491844 LOC106567364 coding downstream 103856 33805531 ~ 33833968 (+)
plch2a LOC106572832 coding downstream 165003 33866678 ~ 34050946 (+)
si:ch211-251b21.1 LOC106567361 coding downstream 354098 34055773 ~ 34064004 (+)
LOC110491848 morn1 coding downstream 372254 34073929 ~ 34154670 (+)
G1366426 NA non-coding upstream 3306 33689214 ~ 33689463 (+)
G1366424 NA non-coding upstream 5612 33686736 ~ 33687157 (+)
G1366387 NA non-coding upstream 54152 33638161 ~ 33638617 (+)
G1366378 NA non-coding upstream 68796 33623763 ~ 33623973 (+)
G1366315 NA non-coding upstream 115878 33576689 ~ 33576891 (+)
G1366431 NA non-coding downstream 5407 33707082 ~ 33707282 (+)
G1366447 NA non-coding downstream 57880 33759555 ~ 33759884 (+)
G1366456 NA non-coding downstream 60155 33761830 ~ 33762708 (+)
G1366457 NA non-coding downstream 61472 33763147 ~ 33763416 (+)
G1366506 NA non-coding downstream 103305 33804980 ~ 33805325 (+)
G1364937 LOC106613263 other upstream 1022638 32669696 ~ 32670131 (+)
G1364907 NA other upstream 1085636 32606790 ~ 32607133 (+)
G1364768 NA other upstream 1290961 32401434 ~ 32401808 (+)
G1363401 NA other upstream 2457383 31234493 ~ 31235386 (+)
G1362902 fgfr2 other upstream 2736794 30954609 ~ 30955975 (+)
G1366438 NA other downstream 11558 33713233 ~ 33713620 (+)
si:ch73-70k4.1 faap20 other downstream 732710 34434347 ~ 34441463 (+)
G1368422 NA other downstream 2041075 35706331 ~ 35779587 (+)
G1368473 yo84 other downstream 2130616 35832291 ~ 35832708 (+)

Expression


Co-expression Network