G1367108


Basic Information

Item Value
gene id G1367108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 34226994 ~ 34227516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1562049
ggaattacctggatttctgcataaattggtcataaagtttgatctgatcttcatctaagtcacaacaatagacaaacacagtgtgcttaaactaataacacacaaattattgtattgttCTTGTCTGCATTGaacacatcatttaaacattcacagtgtagatTGGAAaacgtatgtgaacccctaggctaatgacttctccaaaagctaattggagtcaggagtcagctaacctggagtccaatcaatgagacaagattggagatgttggttagagctgccctgccctttaaaaaacactcacaacatttgagtttgctattcacaagaatcattgcctgatgtgaaccatgcctcggacaaaagagatctcagaagacctaagattcagaattgttgacttgcataaagctggaaagggttacaaaagtatctctaaaagccttgatgttcatcagtccacagtcaGACAAATTGTCtagaaatggagaaagttcagcactgtttcTACTCTACCTAGGAG

Function

NR:

description
uncharacterized protein LOC111572730

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1562049 True 523 lncRNA 0.38 1 34226994 34227516

Neighbor

gene id symbol gene type direction distance location
LOC110491848 morn1 coding upstream 72324 34073929 ~ 34154670 (+)
si:ch211-251b21.1 LOC106567361 coding upstream 162990 34055773 ~ 34064004 (+)
plch2a LOC106572832 coding upstream 176048 33866678 ~ 34050946 (+)
LOC110491844 LOC106567364 coding upstream 393026 33805531 ~ 33833968 (+)
LOC110491842 mthfr coding upstream 479111 33721265 ~ 33747883 (+)
si:ch73-70k4.1 faap20 coding downstream 206831 34434347 ~ 34441463 (+)
LOC110491853 LOC106567354 coding downstream 419030 34646546 ~ 34663067 (+)
LOC110491854 LOC106567355 coding downstream 435682 34663198 ~ 34671581 (+)
LOC110491855 LOC106566937 coding downstream 484135 34711651 ~ 34757113 (+)
LOC110491857 LOC106566940 coding downstream 582666 34810182 ~ 34830816 (+)
G1367106 NA non-coding upstream 2640 34224135 ~ 34224354 (+)
G1367070 NA non-coding upstream 33617 34193009 ~ 34193377 (+)
G1367060 NA non-coding upstream 43198 34183399 ~ 34183796 (+)
G1367056 NA non-coding upstream 47620 34178927 ~ 34179374 (+)
G1367055 NA non-coding upstream 48280 34178505 ~ 34178714 (+)
G1367126 NA non-coding downstream 12339 34239855 ~ 34240080 (+)
G1367138 NA non-coding downstream 19798 34247314 ~ 34249889 (+)
G1367157 NA non-coding downstream 34609 34262125 ~ 34262490 (+)
G1367218 NA non-coding downstream 141114 34368630 ~ 34479265 (+)
G1367229 NA non-coding downstream 150915 34378431 ~ 34379151 (+)
G1366438 NA other upstream 513374 33713233 ~ 33713620 (+)
G1364937 LOC106613263 other upstream 1556863 32669696 ~ 32670131 (+)
G1364907 NA other upstream 1619861 32606790 ~ 32607133 (+)
G1364768 NA other upstream 1825186 32401434 ~ 32401808 (+)
G1368422 NA other downstream 1515234 35706331 ~ 35779587 (+)
G1368473 yo84 other downstream 1604775 35832291 ~ 35832708 (+)
LOC110491910 LOC108432721 other downstream 4186341 38390387 ~ 38416472 (+)
G1372263 NA other downstream 5393858 39621374 ~ 39621885 (+)

Expression


Co-expression Network