XLOC_032768 (anapc11)


Basic Information

Item Value
gene id XLOC_032768
gene name anapc11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 18244220 ~ 18250857 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063753
AAGGAATGAAGGTTAAAATAAAGCAGTGGAACGGTGTGGCATCCTGGTTATGGGTGGCCAATGATGAAAATTGCGGCATCTGTCGGGCATCTTTCAATGGTTGCTGCCCAGACTGTAAGGTTCCAGGAGATGACTGTCCATTGGTCTGGGGTCAGTGTTCACACTGTTTCCACATGCACTGCATCCTGAAGTGGCTGAACTCTCAGCAAGTGCAGCAGCAGTGCCCGATGTGCCGTCAGGAGTGGAAGTTTAAAGAGGGAGACACTTCCTGAGGAGATTAATTGCACAGAAATAAATGCTGCGTCGTATCAGTTTTTATCTATAGTTTGTTTATGATATGTTTCCTTGTTAAATGTCCCAAAAATAAAATGGTGAAAAATGACATGGTATGATTTTTTTTGTAGACTGGTGGAGCTGCTGTTTagtaaatcatgtttaaacagtgacatttgtattgaactgaactgaattaaaggGTTGGGTCACCAAAAgtgaaaattgttattatttacaatGCAGAACAGTCCTAAGGGTATTGCACAAAAGTAAGATATCCTGGCAGAATTTAAGTTACTACGgagatttattttttgcaaagatTATTCCTAGTGATTAAAATGTTAAGATTAAAGAGATAAAAAGATGAATAACTAGAGAGGAAATacatacacagtgctcagcatatacgagtacaaccccttttaaaaaattatattttgatccatttctcagcaaatatatacaaaatttttggtgcatttaaacaaaacagctaTATTTTTTCACCTAACACCTTCAGgtatagaaagataatacatttaaattcaaacgatatattgcaaaaaaataaataaattatgcacTAGAAATTGTCAACAAATGATGATCAAAAAAATTATGATGAAACATCATATAATAGATTCAGTCGACTCAATTAGAAAGAAAAATCCTAAATGAAAGTGATATACATCATCTAGAGTGGCCCATTATGCACTCACATGTCCGGTTTGCTGTTTTGTGAGGCATAATGGTTGTTATATTGTACAAATTGTATTATCAATCTACAATCTAAATACAGTAGATTTAACATCTGACCCAAGTATCaaacaaataagcaaaacaaTAAGAAATTGCAAAACGTTTATCAGTCTTTATTGTTAATAACTAATGGTTTaattactgttttgttttattctatgaaACATATTACTGCTTAAGCTAcaaattcctgaaa
>TCONS_00063754
GCGTGAAGAAAAGCTGAGCATAAATGCTACATTGTGCTCACTGCTCATCATACATGTTATGGATGTGAGAACGTAACAAAGGAATGAAGGTTAAAATAAAGCAGTGGAACGGTGTGGCATCCTGGTTATGGGTGGCCAATGATGAAAATTGCGGCATCTGTCGGGCATCTTTCAATGGTTGCTGCCCAGACTGTAAGGTTCCAGGAGATGACTGTCCATTGGTCTGGGGTCAGTGTTCACACTGTTTCCACATGCACTGCATCCTGAAGTGGCTGAACTCTCAGCAAGTGCAGCAGCAGTGCCCGATGTGCCGTCAGGAGTGGAAGTTTAAAGAGGGAGACACTTCCTGAGGAGATTAATTGCACAGAAATAAATGCTGCGTCGTATCAGTTTTTATCTATAGTTTGTTTATGATATGTTTCCTTGTTAAATGTCCCAAAAATAAAATGGTGAAAAATGA

Function

symbol description
anapc11 Predicted to enable cullin family protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of mitotic metaphase/anaphase transition; protein ubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within anaphase-promoting complex-dependent catabolic process and cell division. Predicted to be part of anaphase-promoting complex. Predicted to be active in nucleus. Orthologous to human ANAPC11 (anaphase promoting complex subunit 11).

GO:

id name namespace
GO:0045842 positive regulation of mitotic metaphase/anaphase transition biological_process
GO:0016567 protein ubiquitination biological_process
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005680 anaphase-promoting complex cellular_component
GO:0031461 cullin-RING ubiquitin ligase complex cellular_component
GO:0097602 cullin family protein binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0061630 ubiquitin protein ligase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-383 Predicted to enable cullin family protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of mitotic metaphase/anaphase transition; protein ubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within anaphase-promoting complex-dependent catabolic process and cell division. Predicted to be part of anaphase-promoting complex. Predicted to be active in nucleus. Orthologous to human ANAPC11 (anaphase promoting complex subunit 11).

Ensembl:

ensembl_id ENSDARG00000102531

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063753 False 1234 mRNA 0.34 3 18244220 18249760
TCONS_00063754 True 460 mRNA 0.44 4 18245072 18250857

Neighbor

gene id symbol gene type direction distance location
XLOC_032767 p4hb coding downstream 15862 18203464 ~ 18228358 (-)
XLOC_032766 ppp1r27b coding downstream 45158 18196961 ~ 18199062 (-)
XLOC_032765 SEC14L1 coding downstream 115499 18074521 ~ 18128721 (-)
XLOC_032764 NA coding downstream 174656 18066594 ~ 18069564 (-)
XLOC_032763 rptor coding downstream 244444 17725788 ~ 17999776 (-)
XLOC_032769 BX005286.3 coding upstream 15739 18266596 ~ 18267362 (-)
XLOC_032770 NA coding upstream 38979 18289836 ~ 18322664 (-)
XLOC_032771 si:dkey-31g6.6 coding upstream 113191 18364048 ~ 18366339 (-)
XLOC_032772 trim25 coding upstream 137470 18388327 ~ 18400623 (-)
XLOC_032773 dre-mir-365-3 coding upstream 265454 18516311 ~ 18516407 (-)
XLOC_032762 NA non-coding downstream 567261 17676192 ~ 17676959 (-)
XLOC_032761 NA non-coding downstream 575394 17667516 ~ 17668826 (-)
XLOC_032760 NA non-coding downstream 708745 17534960 ~ 17535475 (-)
XLOC_032759 BX470083.1 non-coding downstream 728348 17515775 ~ 17515872 (-)
XLOC_032774 dre-mir-193a-2 non-coding upstream 267113 18517970 ~ 18518067 (-)
XLOC_032783 CR925723.1 non-coding upstream 886984 19137841 ~ 19138634 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location