G1368047


Basic Information

Item Value
gene id G1368047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 35134088 ~ 35135804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1563049
cgagaacagtatatacatatgagatgagtatgtaaacaaagtgtcatagtttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtacagtatattcgtATACACGTATACATATgaaataaataatgtagggtatgtaaacattaagtagcattgtttaaagtgtctagtgatattttacatcaattcccattattaaagtggctggagttgagtcagtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgaccccgccttctggatgatagcggggtgaacaggcagtcgctcgggtggttgttgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggcaggtagtttgtccccggtgatgcgttgtgcagatctcactaccctctggagagccttacggttgtgggcggagcagttgccgtaccaggcggtgatacagcccgacaggatgctctcgattgtgcatctgtagaagtttgagagtgtgtcgtccgcaaacttgatgattgagttggaggcgtgcgtggccacgcagtcgtgggtgaacagggagtacagaagagggctcagaacgcacccttgtggggccccagtgttgaggatcagcggggtggagatgttgttacctaccctcaccacctgggggcggcccgtcaggaagtccagtacccagttgcacaatGATAATAAAATAATGGAAAGAGGTGGGAGATAggttggagaaagagaggtaaggGAGGGGTAATTGCAAAAGAAAGAGGATATGACAGTGACAGacaatgaaagagagaggagggaagggtaaaagaaagagtgaaagagggtACATGAGACGGACGGTTGACAGGATTTTGACAACCGTTATTACTCTCAACCCAAAACACTGACATAAATACTGCATCTGTCTGGTCCCTCAGAGAAGTAAGACAATCAATCATCTAAATATGACACAAGGCTTACCTGTACATTTGAGCAGAGCCAGAAGCACCTGGTTCTTCCCATCTACAGAACAAGGAGGATTTTATTACCGGAGTGATCCACATGTGTTTCTgcagtgtctatgtgtgtgtgtctgtgtttgcgtGATGGGTGTGTTACACGTGGGTTTCTGCGGTGTGTGCATTTGTTATACGTGTGCGTTTTACTGACCATCCACAAATCGTTGCAGGCTCTCCACCAGTGTCTTAATTGAGCTGGGCAGGTTCCAAGGGTCCTCCTGAATGTTCTTGTGGATGATGTGACAGTGCACCATCAAGTCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1563049 True 1383 lncRNA 0.47 2 35134088 35135804

Neighbor

gene id symbol gene type direction distance location
LOC118939458 NA coding upstream 159194 34961287 ~ 34974894 (+)
LOC110491044 NA coding upstream 237851 34883901 ~ 34896237 (+)
LOC110491857 LOC106566940 coding upstream 303272 34810182 ~ 34830816 (+)
LOC110491855 LOC106566937 coding upstream 376975 34711651 ~ 34757113 (+)
LOC110491854 LOC106567355 coding upstream 462507 34663198 ~ 34671581 (+)
LOC118939524 NA coding downstream 112974 35248778 ~ 35250357 (+)
LOC110491864 LOC106566946 coding downstream 189612 35325416 ~ 35334464 (+)
LOC110491045 NA coding downstream 870730 36006534 ~ 36018831 (+)
LOC110491871 LOC106572192 coding downstream 885706 36021510 ~ 36022788 (+)
LOC118939525 LOC106572192 coding downstream 893868 36029672 ~ 36030965 (+)
G1367768 NA non-coding upstream 200789 34931431 ~ 34933299 (+)
G1367767 NA non-coding upstream 204103 34929736 ~ 34929985 (+)
G1367766 NA non-coding upstream 204796 34929058 ~ 34929292 (+)
G1367747 NA non-coding upstream 225277 34900092 ~ 34908811 (+)
G1367739 NA non-coding upstream 247274 34886570 ~ 34886814 (+)
G1368148 NA non-coding downstream 133808 35269612 ~ 35300862 (+)
G1368159 NA non-coding downstream 150289 35286093 ~ 35289843 (+)
G1368250 NA non-coding downstream 275660 35411464 ~ 35411785 (+)
G1368294 NA non-coding downstream 342729 35478533 ~ 35478763 (+)
G1368307 NA non-coding downstream 356828 35492632 ~ 35521748 (+)
si:ch73-70k4.1 faap20 other upstream 692751 34434347 ~ 34441463 (+)
LOC110491848 morn1 other upstream 979445 34073929 ~ 34154670 (+)
G1366438 NA other upstream 1420468 33713233 ~ 33713620 (+)
G1364937 LOC106613263 other upstream 2463957 32669696 ~ 32670131 (+)
G1364907 NA other upstream 2526955 32606790 ~ 32607133 (+)
G1368422 NA other downstream 606946 35706331 ~ 35779587 (+)
G1368473 yo84 other downstream 696487 35832291 ~ 35832708 (+)
LOC110491910 LOC108432721 other downstream 3278053 38390387 ~ 38416472 (+)
G1372263 NA other downstream 4485570 39621374 ~ 39621885 (+)
G1372542 NA other downstream 5058008 40193812 ~ 40194351 (+)

Expression


Co-expression Network