XLOC_003277 (pimr94)


Basic Information

Item Value
gene id XLOC_003277
gene name pimr94
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 11842724 ~ 11849995 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006454
GTGTCGGTGAGGGATATGAGAAGAGTAGGAGAGAGGACGAGTGTTTGGATAGGAGGCCAGGCAGGAAACGAAAGATGGAGGAGATTTCTGCTGAAGAGCCTCCAAGAAAGAGAATGAAAGAGTTTTTTAAGGGGTGTGAGAGAAAGAGGAAAATAGAGGACGGTCTTGATGAGGGAccagagagaaaaagaagaaaatatgaGTATTTAGATAGGAGGCCAAACAGGAAACGAAAGATGGAGGAGATTTCTGCTGAAGAGCCTCCAAGAAAGAGAATGAAAGAGTTTTTTAAGGGGTGTGAGAGAAAAATTAATGGGGAAGACAGTTTGTCTTTTTCTAGTTTGCCTATTAGGAGGCTAAGCAGAAAAAGAAAGTGGGAAGAGAGTTCTGCTGAAGAGCCTCCGACAAAGATAAGCAGGACAGAGTATTTTATTAAGGGGTTTAAGAGAAAAAGGAAAATGGAGGATATATTTGAAGAGGGACCCGAGAGAAAAAGgagaaaatatgaatatttagagTGTTTAAATAGGAGGCAACCCAGAAAAAGAAAGAGGGGTGAGATTTTTGGTGAAGAGCCTCTCAGAAAAAGGAAAGAGGATCACTATTTTGATGGGGGgttaaaaagtaaaagaaaaagggAAGAGATTTATTTTGAAGAGTCTTCTAGAAAGATAGAGGATGTTGATATGGGGTCAGAGACAAAGAGGAAAAGGGAGGAGGGTTTTGATGAGGGACCAGAAAGAAAAAGGAGAATGTATTTTGATTGGAGGCCGAACAGAACAAGAAAGAGAGAGGAGAGTTTTGTTGAAGAGCCTTTAAGAAAAAGGAGAAAATCAGAGTATTTTGATAGGAGGCCGAACAGAAAAAGGAAGCCGGAAGACAGTTCTGTTGTAGTGTCTCTGAGGAAAAGGAGAAAGGATGAGTATTTTGATAGTGGGCCGAACagtaaaagaaagaaggaagaaagtTCTGTTGAGCATCCGGAAATGTGGAGAATGTTGGAGAGCTTTAAAAAGCTGACCACTTTTTACTCCAGTCCAACAATTGAATTAATGGATGTCCAGAGTTCTTCCAGCCATTCTGTTTCGGTTCAAGCACACCACAGTCCAACCAGTGATATCCTGAGGCGGTATGAAGTCAGAAGAATTCTCTGTAGGAGAGGATCTGACACCATCTACGAGGGCAGGCGTATGACCGATAACCTCAAGGTGGCAGTAAAAGTTGTAAGAAAGTTTTGGGAGGTGACATGCATAGTGccTGGTCATCCTGTAGCCCTTCCATTAGAAGTCGGTCTATTAGCCCTTGTTAATAAGAGCCTCAGAGGTCCAAAGACCATTCAGCTGCTGGACTGGCAGGATCTGCCTGATTATTACACTATTATCTTGGAGTGTCCATCACCACGGGTTTGCCGTGAAGCCAACTTGAGTCAACAGAGCAACGGAACAATATCAACAATTGCAGGAAAGTCCAACAGCTCTGGGCTGTATGATACCGATCAAAGTGCAACATCAGTATCCAGTTCCAGTACAGATGATGAGCCAGCGAGAAACATGAGGATGACAGGCAATATAGATTTTGTACTTCTCTGGACCCAGAACAGAGAAGACAAACTGCTACAACCGATTAGCGTTGAGATGGTGTCCGCTCAGTCGGTAAAGCAGCCTGCTGTGCCAGTACATCCAAGACCCGCTGGACCTGCTGGAAATGGACAAAACATTTTGAATGGGTTTGAATTAATAAGAATGGTAGTCCATGGAACATTTGGCACCGTCTATGAAGGGAAACGCAGACGAGATGGCCTTAAGGTGGCAGTAAAATTCACCAGAAAACGCAGGAGCATGCAGTACATCAACATTCCTGGACATTTTGCACCCGTTCCATTAGAGGTGGCCAGGTTACTCATGCCTAAAAAGGACCCAACAGTTCCACAGAAGTTTAAGCTGCTGGACTGGCAGGACAAGCCCGATTACTACATTATGGTCCTGAAGCGTGCCTCATCGTGGAAAGatGCAAAATCAACGACTGCACCGCAAGAAAAGAACCTGCTACAACCGATTACTGTTGAGATGGTGTCTGCCTTGTCATCGATGAAACAGTGTACTCTGCCAATATATCAGGGCCCTGCTAGAAATGGACAGAAAAGGTTGAGGGGGTTTGTATTAAAGAGAATGATTGGCCAGGGAGGATTTGGAAGAGTCTATAAAGGGACCCGCATACACGATGGCAGAAAGgtGGCAGTAAAGTTCATCAAGAAGTGGGCGACCATGCAGTACATCAatattCCAAGACATTTTGCACCTGTTCCATTAGAGGTTGCCCTGATGCTCATGGTTAATAAGAGCCCCAGGGTTCCAGAGATCATTCGGCTCCTGGACTGGGAGGACTATCCTGACCACTACATCTTGGTTTTGGAACTTTCCACACCCTGTGAAGATCTGAGCGTCTATGTTAAACGCTCTGGAGGATTCCTCAATGAAACCAAAGCACGGGTTATCATGGGGCAGACGATACGGGCCGCTCAAGTGTGCTGTGCTCGCGGAGTCTTTCACCGTGACATAAAGCTGGAGAACCTGCTGATCAACCCACAAACACTCCGGGTCAAACTGATTGACTTTGGGTGCGGGGACCTCCTGAAGGATTCTGCGTATCATCACTATAGTGGGACGAGACAGTATTCCCCTCCTGAGTTTAACATGATGAGACGGTACCATGGGAAACCTGCCACTGTGTGGTCATTGGGAATCCTGTTATATGTACTGCTGTGTGGACGCCTTCCACGATCCAGGATTTTGCTGCGGATGAATTCAAGCTGTTGGTCCAGTTCTCGCTTGTCACATGACTGTTGTGATCTGATGTGCTGCCTCCTGCAACAAGATCCATCTAAGCGGATCAGTTTAGAAGACATCCCACATCATCCATGGtttaagGTCACCAAATGTAGCAGCTTGCCAAAGAGAAATGCTGCACAGCAGGGGAAGATCAGGCCACTACATGAGAACGAGAGGGAAACACCGAAGGGAATCAAAGTAGGAT

Function

symbol description
pimr94 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058663

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006454 True 3033 mRNA 0.45 12 11842724 11849995

Neighbor

gene id symbol gene type direction distance location
XLOC_003273 NA coding upstream 19570 11809223 ~ 11823154 (+)
XLOC_003272 pimr93 coding upstream 38004 11797026 ~ 11804720 (+)
XLOC_003271 CR848705.1 coding upstream 46425 11792408 ~ 11796299 (+)
XLOC_003270 jupa coding upstream 60813 11719575 ~ 11781911 (+)
XLOC_003269 CR556712.1 coding upstream 252048 11588078 ~ 11590676 (+)
XLOC_003278 NA coding downstream 41245 11891240 ~ 11903510 (+)
XLOC_003279 zgc:64002 coding downstream 124713 11974708 ~ 11979854 (+)
XLOC_003280 si:ch211-156l18.8 coding downstream 202796 12052791 ~ 12092178 (+)
XLOC_003282 NA coding downstream 316491 12166486 ~ 12166790 (+)
XLOC_003284 si:ch211-156l18.7 coding downstream 325167 12175162 ~ 12184543 (+)
XLOC_003267 BX324177.19 misc upstream 380122 11462306 ~ 11462602 (+)
XLOC_003266 BX324177.20 misc upstream 381622 11460806 ~ 11461102 (+)
XLOC_003265 BX324177.12 misc upstream 392282 11450155 ~ 11450442 (+)
XLOC_003264 BX324177.22 misc upstream 400968 11441460 ~ 11441756 (+)
XLOC_003262 BX324177.15 misc upstream 413035 11429393 ~ 11429689 (+)
XLOC_003281 BX469912.12 misc downstream 312757 12162752 ~ 12163048 (+)
XLOC_003283 BX469912.14 misc downstream 321300 12171295 ~ 12171591 (+)
XLOC_003285 BX469912.9 misc downstream 337311 12187306 ~ 12187602 (+)
XLOC_003286 BX469912.6 misc downstream 339730 12189725 ~ 12190024 (+)
XLOC_003287 BX469912.15 misc downstream 358914 12208909 ~ 12209205 (+)
XLOC_003268 NA non-coding upstream 328739 11504014 ~ 11513985 (+)
XLOC_003253 NA non-coding upstream 483009 11359421 ~ 11359715 (+)
XLOC_003302 NA non-coding downstream 616771 12466766 ~ 12467060 (+)
XLOC_003304 NA non-coding downstream 643877 12493872 ~ 12494177 (+)
XLOC_003307 NA non-coding downstream 672775 12522770 ~ 12523029 (+)

Expression


Co-expression Network