G1370601 (LOC106566960)


Basic Information

Item Value
gene id G1370601
gene name LOC106566960
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 37277645 ~ 37278677 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1565884
GGCGGTGTAAGGCCTGTCAGTCGCTCTTGAGCCAAAACACCAGCCCCACCAATACGCTGTTGGCACACTCCAACCATAGGAGGTTGATGCTGATGTAGGCAGGGACTGCAAGGCTCAAAAGCTCACAGGCGATGCACATGACCAGGTAAGATGCCCACGTTGTGCCAAAGTCCAaagtcaggctgaggtaaaggggggGCCTCTGCCATTCGGTATCCACTGCCAGTGCTTTCTGCTCGTCCTCGTCACCCCCTAGCTGCTGTAACTTGGCATACCTGAATCTCAAGTGGCTCTGCAGCATTGGGTTAACATTATCCCTCTGCTCTGACAGCCTGTTGGCCTCCTTCAGCCACAAAGGCATCTGTTTGTAGTGGAGCAGCATTACACAGCAGATGGCCACGGAGATCCCCACTGAGAAATGTACCACAAACACAGACTCCTGCACAGTGCACCCTAAAGCGTTCCTCCCTCCCTCGTACTCAACCTCTAGGAGGTTGGTGACTGCTGAGCAGCAGGAGTGCACACCGGCCAGCACCCACACCAGCAGCGTCAGGGAATAGTTCCATAGGTCCCTACAGGGAGCGTCGTGGCACGTGGTGTAGCGTGGCTCGGAGGCGTAGTCCAGCAGCCCCAGGCTCAGCATGGGCAGAGGCAGCGCGTTGAACACGGCTGAGGCATGCGCCAAGAGGAAgcagatggacaccggggagcGGGCGGGTCCGAGGAACCACACAGCCGCCACAGCGCACAACAACACCACATCGACCAGGAAGACGGAGAGGCCACAGACGCCCATGAAGGAGGTGTGCAGCCAGCGCAAGCACATCGACAGGACCAGACAGTCCAGGCCCACCTTTAACAGCAAGATGAACAGAAACTGACCGGTGCTGTCCTCGTAGTAGctcccctcctcttcccaggACTCAATGATGGCCAGCATGTTGAAGCTTTTGCCGTGAGGACTGAGCCCAGCTCCAGAAGTCATCTACTGGGTCTGTGACGTTCCACCCGATGTCACCATGCTCAGGGAAAA

Function

NR:

description
uncharacterized protein LOC110491881

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1565884 True 1033 TUCP 0.58 1 37277645 37278677

Neighbor

gene id symbol gene type direction distance location
LOC100305135 LOC100305135 coding downstream 49330 37218796 ~ 37228315 (-)
LOC110492898 LOC106567320 coding downstream 229528 37046699 ~ 37048117 (-)
LOC110492897 LOC106567319 coding downstream 239378 37036862 ~ 37038267 (-)
LOC110491877 NA coding downstream 915423 36351765 ~ 36362222 (-)
LOC110491872 LOC106566950 coding downstream 1199947 36071627 ~ 36077698 (-)
LOC110491882 LOC106572212 coding upstream 22188 37300865 ~ 37302929 (-)
LOC118939528 NA coding upstream 319009 37597686 ~ 37604276 (-)
LOC110491896 LOC106566965 coding upstream 344156 37622833 ~ 37634876 (-)
LOC118939599 NA coding upstream 404842 37683519 ~ 37683637 (-)
LOC118939459 LOC106600248 coding upstream 407673 37686350 ~ 37687854 (-)
G1370602 NA non-coding downstream 596 37276276 ~ 37277049 (-)
G1370598 NA non-coding downstream 5932 37271513 ~ 37271713 (-)
G1370597 NA non-coding downstream 8405 37268995 ~ 37269240 (-)
G1370595 NA non-coding downstream 9852 37267366 ~ 37267793 (-)
G1370586 NA non-coding downstream 15845 37261562 ~ 37261800 (-)
G1370591 NA non-coding upstream 4175 37282852 ~ 37284485 (-)
G1370593 NA non-coding upstream 9634 37288311 ~ 37288678 (-)
G1370604 NA non-coding upstream 15792 37294469 ~ 37294685 (-)
G1370606 NA non-coding upstream 17491 37296168 ~ 37296462 (-)
G1370607 NA non-coding upstream 18206 37296883 ~ 37297185 (-)
LOC110491868 LOC106566949 other downstream 1284174 35474174 ~ 35994010 (-)
G1369101 NA other downstream 1497209 35747976 ~ 35780436 (-)
G1369107 NA other downstream 1524704 35748857 ~ 35752941 (-)
LOC110491862 tnfrsf6b other downstream 2198040 35077807 ~ 35079706 (-)
LOC110491043 NA other downstream 3407747 33863087 ~ 33870055 (-)
G1370826 NA other upstream 382012 37660689 ~ 37661465 (-)
G1371532 NA other upstream 1004731 38283408 ~ 38284066 (-)
G1372845 LOC106566999 other upstream 1492951 38771628 ~ 38772877 (-)
G1372979 NA other upstream 1712915 38991592 ~ 38992220 (-)
si:dkey-157g16.6 LOC106567002 other upstream 1734691 39013363 ~ 39043903 (-)

Expression


Co-expression Network