G1370844


Basic Information

Item Value
gene id G1370844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 37666481 ~ 37695534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1566155
TGCTGACCTTGAAATAGCCGCCAACCGCCCCCACCGGAATTTCAACAATAATATGAGCCTCTGTGACTAAAACAGAGTAGTTTCTGGCAGCCATTTCCTCAGTGTCCAGCCTCTTAGCGTCAATTCCCATGTACACCTCCAACATGGTGAAGGCATCAGAGGAGAAAAATGACAAAGTACTGGTCATCCTGAATATGGCTCTGTAAGGGAGACGAGGGATGCAgtcaggctgtaatacacaatTGGAGTGCAAAAAAAGGTAAATGTTCCTTATAAGCCAGAATGTTAAATACAATTATTCTACCGCTTGTCTTTTTGCCGCTCGTAATTTAAGACAAAATATCCAAAGGAAAGTATTGGTTACCAGACTTGAGAGCTGGTAGGTGTATGGTTGGCAACTTGCATTTCCGGCGGTGCGCATTTTCAGAGCAACTGACACGTAAAGTAAACActtgcacaatatgtaaacagcAGCCGAGTGTTCCTTGCATTCAGTTGAGTGGCAAAGCTACCGGCTACCTAAAAAGTCAGGTAAACAATACTTTAGTGTGGATATTTGGTCTCAAATTTCAAGCGGCTAAAGGACAAACTGCAAAGACAAGCGGTAGAGTatgtttaaatgtaattttatgcAAAATTCACACAATTCTGCAATCCATTGTATATTAGCCTGATTAAGCAGACAATTGCTCAATAAGAAACATTTTACACAAGACAACCTTTCTAGGAGTTTACCCATGAG

Function

NR:

description
uncharacterized protein LOC110514515

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1566155 True 742 lncRNA 0.41 2 37666481 37695534
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110491896 LOC106566965 coding downstream 31605 37622833 ~ 37634876 (-)
LOC118939528 NA coding downstream 62205 37597686 ~ 37604276 (-)
LOC110491882 LOC106572212 coding downstream 363552 37300865 ~ 37302929 (-)
LOC100305135 LOC100305135 coding downstream 438166 37218796 ~ 37228315 (-)
LOC110492898 LOC106567320 coding downstream 618364 37046699 ~ 37048117 (-)
LOC118939610 NA coding upstream 23720 37719254 ~ 37719372 (-)
tns2a LOC100380686 coding upstream 112450 37807984 ~ 37861449 (-)
eif4ba LOC106566970 coding upstream 167931 37863465 ~ 37884243 (-)
LOC110491902 LOC106566972 coding upstream 219249 37914783 ~ 37923966 (-)
LOC110491903 LOC106566975 coding upstream 340526 38036060 ~ 38042324 (-)
G1370828 NA non-coding downstream 3817 37662300 ~ 37662664 (-)
G1370822 NA non-coding downstream 7414 37658711 ~ 37659067 (-)
G1370820 NA non-coding downstream 9938 37656193 ~ 37656543 (-)
G1370819 NA non-coding downstream 10646 37655611 ~ 37655835 (-)
G1370816 NA non-coding downstream 12559 37653693 ~ 37653922 (-)
G1370858 NA non-coding upstream 42496 37738030 ~ 37738649 (-)
G1370859 NA non-coding upstream 44095 37739629 ~ 37740716 (-)
G1371216 NA non-coding upstream 57682 37753216 ~ 37758055 (-)
G1371221 NA non-coding upstream 66947 37762481 ~ 37762743 (-)
G1371226 NA non-coding upstream 72387 37767921 ~ 37768164 (-)
G1370826 NA other downstream 5016 37660689 ~ 37661465 (-)
G1370601 LOC106566960 other downstream 387804 37277645 ~ 37278677 (-)
LOC110491868 LOC106566949 other downstream 1673010 35474174 ~ 35994010 (-)
G1369101 NA other downstream 1886045 35747976 ~ 35780436 (-)
G1371532 NA other upstream 587874 38283408 ~ 38284066 (-)
G1372845 LOC106566999 other upstream 1076094 38771628 ~ 38772877 (-)
G1372979 NA other upstream 1296058 38991592 ~ 38992220 (-)
si:dkey-157g16.6 LOC106567002 other upstream 1317834 39013363 ~ 39043903 (-)
G1373200 NA other upstream 1726616 39422150 ~ 39422852 (-)

Expression

G1370844 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1370844 Expression in each Bioproject

Bar chart with 9 bars.
G1370844 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
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Co-expression Network