G1371438


Basic Information

Item Value
gene id G1371438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 38130717 ~ 38132577 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1566788
ggtataatgctacaagcttggcacaactgtatttgaggagtttcacccattcttctctgcagatcctctcaagctctgtcaggttggaaggggagcgtcactgcacagctattttcaggtctctccagagatattagatcgggtttaagtctgggctttgactgggccactcaagggcattcagagacttgtcccgaagccactcctgtgttgtcttggctgtttgcttagggtcgttgtcctgttggaaggtgaaccttctccccagtctgaagtccgggttgctctggagcaggttttcatcaagcatctctctgtactttgctccgttcatctttcccttgatctgactagtctcccagtccttgcctctgaaaaacctccccacagcatgatgctgccactaccattcttcaccgtagggatggtgccaggtttcctccagacgtgacgcttcgcattcaggccaagcgggctgtcatgtgccttttactgaggagtggcttcctcctggccactctaccataaagcctgattggtggagtgctggagagatggttgtacttctggaatgttctcaaatctccacagaggaactctggagctctgtcagagtgagagtgattatagggttcttggtcacctcacagACCaagcacccttccccagatctgtgcctcgacccaatagtgtctcggagctctacagacaattcctttgacctcatggcttggttttcctCTTGCATGCACTGCCAAtcgtgggaccttaaatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttacaacaggtggactccaatcaagttgtagaaacatctcaaggatgatcaaaggagacaagatgcacctaagctcacattttgagtctcatagcaaagggtctgaatacttatgtaaataaggtatttctgttttttattttgaatatatttgcaaaaatgtcaaaaataaattatatattttttatttaatccattttagaataaggctgtaacgtaacgaaatctgaaaaaaggtaaggggtctgaatagtttctgaatgcactgtacagtgcCCTCTGTAATTGTTGGGACAGTGAAATATTGTTTTCTTCTATTGGCTCTTTACTCCagtactttggatttgaaatgatacatgttaaagtgcagactgtctgctttaatttgagggtatttaaaACGTGAATATTTGAATATTTCAGTATTTGAATACTGAATAAGGATGAGTGAGAACGTTACAtacgcacaaatatcataaccccccccaaaaatgctaacctcccctgttattataatggtgagaggttagcatgtcttgggggtatgatatttttgCGTCTGTAacctcatcattattcacaattaattcaggactatccgtaatcatggtagcatccacattaatgtagaagtgttaagaacatattatattcttatttacaataaaaatgactccaaaatgacacaatacattattctattgggcacaaaataatctgaaacacaactaaaacaaacagcaaatgcatctaaCAAAGTTTGTAGAATCACAAGCTTGgtgtaatcattgcgtgctaggaatttgggaccaaatactaaacttttgactactttaatacacataggttaatttgtcccaatacttttggtcccctaaaatgtgctgtaatttctaaactcgacatggatgaaaataccctcatgtcaaagctgacagtctgcaatGTAACCTCAGAGG

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1566788 True 1776 lncRNA 0.41 2 38130717 38132577
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110491903 LOC106566975 coding downstream 88393 38036060 ~ 38042324 (-)
LOC110491902 LOC106566972 coding downstream 206751 37914783 ~ 37923966 (-)
eif4ba LOC106566970 coding downstream 246474 37863465 ~ 37884243 (-)
tns2a LOC100380686 coding downstream 269268 37807984 ~ 37861449 (-)
LOC118939610 NA coding downstream 411345 37719254 ~ 37719372 (-)
LOC110491907 LOC106566978 coding upstream 5775 38138352 ~ 38159154 (-)
LOC110491911 LOC106566982 coding upstream 293713 38426290 ~ 38448569 (-)
mapk14a LOC106566983 coding upstream 339663 38472240 ~ 38509303 (-)
elapor1 kiaa1324 coding upstream 377082 38509659 ~ 38527874 (-)
LOC110491916 tmem167b coding upstream 399445 38532022 ~ 38533685 (-)
G1371420 NA non-coding downstream 27232 38098338 ~ 38103485 (-)
G1371276 e2 non-coding downstream 97726 38029825 ~ 38032991 (-)
G1371278 NA non-coding downstream 150228 37931034 ~ 37980489 (-)
G1371249 NA non-coding downstream 330740 37799756 ~ 37799977 (-)
G1371248 NA non-coding downstream 330971 37799422 ~ 37799746 (-)
G1371441 NA non-coding upstream 11739 38144316 ~ 38144746 (-)
G1371456 NA non-coding upstream 31351 38163928 ~ 38164147 (-)
G1371458 NA non-coding upstream 34174 38166751 ~ 38167021 (-)
G1371461 NA non-coding upstream 36329 38168906 ~ 38169163 (-)
G1371464 NA non-coding upstream 40001 38172578 ~ 38172846 (-)
G1370826 NA other downstream 469252 37660689 ~ 37661465 (-)
G1370601 LOC106566960 other downstream 852040 37277645 ~ 37278677 (-)
LOC110491868 LOC106566949 other downstream 2137246 35474174 ~ 35994010 (-)
G1369101 NA other downstream 2350281 35747976 ~ 35780436 (-)
G1371532 NA other upstream 150831 38283408 ~ 38284066 (-)
G1372845 LOC106566999 other upstream 639051 38771628 ~ 38772877 (-)
G1372979 NA other upstream 859015 38991592 ~ 38992220 (-)
si:dkey-157g16.6 LOC106567002 other upstream 880791 39013363 ~ 39043903 (-)
G1373200 NA other upstream 1289573 39422150 ~ 39422852 (-)

Expression

G1371438 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1371438 Expression in each Bioproject

Bar chart with 19 bars.
G1371438 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network