XLOC_003279 (zgc:64002)


Basic Information

Item Value
gene id XLOC_003279
gene name zgc:64002
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 11974708 ~ 11979854 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006455
CTTCGTGTAACTCAGTTACTCAGCTAAGTCAGCTTGTGATGGGAACATTGCGTCGATTTAGAAactctttaaaattaaataaatgtcaatttgCATGAAATGACTGACTAATAAGCAGCTTGGTTTCAGTTTCAATCTCAGTCAGGCGATAAGAAGTTGGAAGCCTCGTTTCCCAAGGAGAGTAGCTGTCTTAAAGCCTTCAGAACCTTTGTAATCATGAGTGAATGCACAAACTTCACAGAAGGAGAATTCTATCAGGCACATTTTGACCCGCGTGCTTATGTCAGGAATTTCTACTCCAGCCCTCGAGGACACTCCGACGAAAAGGATTTCCTTACTTTTGTTTTAGGGGTCTTCAGTAGATTATTTTCAACTGggAAACACAGAGGGCAAAGGTTGATAGACGTGGGGAGCGGACCATCAATCCACTGCGTCATTAGCGCCTGCGCACACTATGACGAGATTCTTCTGTCTGATTTCTCTGACAACAATCGTAGAGAAATTGAAAAATGGCTAAAAAACCAAGAAGGGTGTCTAGATTGGAGTCCCATCCTCCAGCACGTTAGTAAAACGGAGGGGAAAAGACCGTCCGATTTAGAGGCTACGCTGAAGCAAAGAatcaaaaaggttttaaaatgtgACGTCCGCCTGGAGAATCCGTTTGATCCGCTGACACTGGAACCAGCTGACTGTGTCATTACATCTCTGTGCTTGGAAGCAGCCTGTAAAGACATGCAGATATACCGCCAGGCTTTACATGGGTTGACCAAGCTCCTGTGTCCCGGTGGACTATTCGTCATGGTGGGTGTTCTGAGTGAAACCTTCTACAAGGTGGATGAACAGCTCTTTTCTTGTCTTAGCCTCAAACAGAATGATATCGAGGAAGCACTGAAAGGTTTTGGCTTCTCTATCCAAGAGTTTAATGTACTACCTGCTGAAGACCAAAACAATTCTGTGTCTGACTTTGAGGCCGTTTTTGTTCTTGTGGCGACCAAGAACATCTGATTACTTGCAAATAAagaaatgcatataataatgacTAATCCGATGCATTTAAAACTAGTAGGTgcctaattttttattaaattttaaatggtATTTGAAAAGATAAATCATAGATAATTTTTTATGCTAATGTGTttcttaaaatttattaaaacatttgtatatatccagtgctacaagtgtgataGTGATATTGATTCTGTTAGATTTTGATGTATTTGCTTAAACGttcttgggtggctcgccaatgtattaCTCTTTGTAtgactctaatacataaaataaatacgcTGACCAAAGTTTTTACtgagagaagactttattgaagacaatagCTTTTTTCCATCcttctatttttatgcacattttggatgtACGCATAAACAACGATTGACGTAAACGctaagatgcgcatacattttgatagGGCTGGACATTATGGCAAAAAATCATATCACGaaatatttcttaatttcggTTGATACGATATAATTccgatatcgatatggacaatattaGCCAGGAAAAAACTGGCAAGACTACACACAATGGATGTCTGTACCCACAAATGTCTGCAAACGgaatttgcaaagtctataatAAATCCAGGctcttatacatttttaaaacttaaataaaaacagtacaataaatcatgtttactttttatttgtatagcctttacaaacaagaaatgtgaaataaactatcaaataaataaaactctaaGACTCAGCTCtctatataacacacacacacacaccttttcagATGCAGATACTTGTTTGCAAATGAAACAAGCCATACAATCTATCAATTCTGTATAGGGTCATAAAAACTCTTTATGTTTGAGGAACTACTTCCTCTACCGATTTAAATCCCAAGTTGACTGTTGGATGGCTGATCAATTGCAAAAACGATCGCCCTTCCACAtggcagaataaggtcaatacatattttaattctAAAAAATTCATTACCTATTTTGATTTATATAtgaggtggcgcagtaggtagtgctttcacctcacggaaagaaggtcgctggttcaagcctcgtctgggtcaggtggcgtttcggtgtggagtttgcatgttctctctgcgtttgcgtgggtttcctccgggtgctccggttttcccccacagtccacagacatgcagtacaggtgaattgggtaggctcaagttgtccttagtgtatgagtgtgaatgagtgtgtgtacgtttcccatagatgggtagTGGGTGGAAGggtgtccgctgcgtaaaaaacgtgctggacaagttggcggttcattccgctggagCAACctcggattaaaaaagggactaagccgaaaagaaaatgaatttacatatgaacaaaaacaaaacaaatctatgTAAAACAGTGTGATCTATGTCATAAAAGGAAAtgtttaacaataaataattaggACATGTTTGTATGTAATTTGATTTCTCTCTTAGtcttgttgtcattttcacttcaTTGCATGTTCGTGTGAATTTTGTGGTTCGTAATTTTTCAATGTattctataaaataaaaacaagtcagTCTAATAAAAGGTATCTAATTA

Function

symbol description
zgc:64002 Predicted to enable N-methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in Alzheimer's disease; hypertension; and multiple sclerosis. Orthologous to several human genes including INMT (indolethylamine N-methyltransferase).

GO:

id name namespace
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008168 methyltransferase activity molecular_function
GO:0008170 N-methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1329 Predicted to enable N-methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in Alzheimer's disease; hypertension; and multiple sclerosis. Orthologous to several human genes including INMT (indolethylamine N-methyltransferase).

Ensembl:

ensembl_id ENSDARG00000086998

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006455 True 2590 mRNA 0.38 3 11974708 11979854

Neighbor

gene id symbol gene type direction distance location
XLOC_003278 NA coding upstream 71198 11891240 ~ 11903510 (+)
XLOC_003276 NA coding upstream 98578 11839827 ~ 11876130 (+)
XLOC_003275 NA coding upstream 103561 11833344 ~ 11871147 (+)
XLOC_003274 NA coding upstream 120262 11820364 ~ 11854446 (+)
XLOC_003277 pimr94 coding upstream 124713 11842724 ~ 11849995 (+)
XLOC_003280 si:ch211-156l18.8 coding downstream 72937 12052791 ~ 12092178 (+)
XLOC_003282 NA coding downstream 186632 12166486 ~ 12166790 (+)
XLOC_003284 si:ch211-156l18.7 coding downstream 195308 12175162 ~ 12184543 (+)
XLOC_003302 NA coding downstream 486912 12466766 ~ 12467060 (+)
XLOC_003304 NA coding downstream 514018 12493872 ~ 12494177 (+)
XLOC_003267 BX324177.19 misc upstream 512106 11462306 ~ 11462602 (+)
XLOC_003266 BX324177.20 misc upstream 513606 11460806 ~ 11461102 (+)
XLOC_003265 BX324177.12 misc upstream 524266 11450155 ~ 11450442 (+)
XLOC_003264 BX324177.22 misc upstream 532952 11441460 ~ 11441756 (+)
XLOC_003262 BX324177.15 misc upstream 545019 11429393 ~ 11429689 (+)
XLOC_003281 BX469912.12 misc downstream 182898 12162752 ~ 12163048 (+)
XLOC_003283 BX469912.14 misc downstream 191441 12171295 ~ 12171591 (+)
XLOC_003285 BX469912.9 misc downstream 207452 12187306 ~ 12187602 (+)
XLOC_003286 BX469912.6 misc downstream 209871 12189725 ~ 12190024 (+)
XLOC_003287 BX469912.15 misc downstream 229055 12208909 ~ 12209205 (+)
XLOC_003273 NA non-coding upstream 151554 11809223 ~ 11823154 (+)
XLOC_003307 NA non-coding downstream 542916 12522770 ~ 12523029 (+)
XLOC_003319 NA non-coding downstream 738255 12718109 ~ 12718402 (+)

Expression


Co-expression Network