XLOC_032793


Basic Information

Item Value
gene id XLOC_032793
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 19439100 ~ 19440159 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064724
tgcagcagcacgccacgaggttttgctcagacttttgggacgtttggaattgctccgtcttgtcaccatgtaacacatcaagacccatgggatttcatcagccactcaccatcagagtcctcagtggaagctgagaagagcagaagaggaagccaagcaagagatgccagaaaaaaagggggaaggaaataatgtgtaattttgctgtttgagtataggcaggcgcagtgggtagcacaatcgcctcacagcaagaaggtcgctggttcgagcctcggctgggtcagttggcatttctgtgtggagtttgcatgttctccccatgttagcgtgggtttcctccaggtgctcccacaagtc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064724 True 360 lncRNA 0.51 2 19439100 19440159

Neighbor

gene id symbol gene type direction distance location
XLOC_032792 CR387927.3 coding downstream 46123 19392860 ~ 19392977 (-)
XLOC_032791 grb2a coding downstream 57107 19344749 ~ 19381993 (-)
XLOC_032790 mif4gda coding downstream 97914 19334365 ~ 19341186 (-)
XLOC_032789 gga3a coding downstream 105153 19315715 ~ 19333947 (-)
XLOC_032788 sumo2a coding downstream 125175 19306192 ~ 19313925 (-)
XLOC_032794 usp43a coding upstream 41235 19481394 ~ 19665114 (-)
XLOC_032795 cfap52 coding upstream 227460 19667619 ~ 19683406 (-)
XLOC_032796 CU929170.1 coding upstream 276264 19716423 ~ 19716541 (-)
XLOC_032797 ntn1a coding upstream 363889 19804048 ~ 19926657 (-)
XLOC_032798 BX537296.3 coding upstream 695900 20136059 ~ 20136156 (-)
XLOC_032784 CR925723.3 non-coding downstream 291882 19146424 ~ 19147218 (-)
XLOC_032783 CR925723.1 non-coding downstream 300466 19137841 ~ 19138634 (-)
XLOC_032774 dre-mir-193a-2 non-coding downstream 921033 18517970 ~ 18518067 (-)
XLOC_032773 dre-mir-365-3 non-coding downstream 922693 18516311 ~ 18516407 (-)
XLOC_032799 BX537296.2 non-coding upstream 738277 20178436 ~ 20178533 (-)
XLOC_032800 NA non-coding upstream 761169 20201328 ~ 20360733 (-)
XLOC_032801 NA non-coding upstream 785278 20225437 ~ 20226644 (-)

Expression


Co-expression Network