G1373226 (LOC100380735)


Basic Information

Item Value
gene id G1373226
gene name LOC100380735
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 39529924 ~ 39535299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1568834
gaatgcactgtatatgcgtgCGTGCATGCTTGTCCAGGTGATGCTTCCTTACCTCTGTAAAGAGCCACTCCTGTTGTGGGGCCACGCTAGTCCCTATTCCTTTTAGTGTACAGAGCTCAATCTTAACCTGGTCTGGCTGGGTGTTGGCCTGTAGACACAGCTGCTTCCCTATGTTGTGACGCAGTTCCTTATGAGACGTGTACTCAAAGTACTGGGGAAACTGGTTACCCCCCATATTGTGGCACGTGTACATGATCAGTGGCTTCCCGCCTTCATTTTTCTCTCCCACATCCAGACAGCTCTGAGCACCAGAGTTCTTAATCTGCGCGCACACACATTTAACAATGAACACTTATGCATCGCCATCATGTACAGTACTTTCCTAGTCACACTTtatgtagatgctctacagatggtcatactatcaacaaaccaTCTGtcgataagcaactgcttgctaaggttacggttaCGTTTAGAATAACGGGTTGGGTCagtgttagggttaagtttagggttagtagatatTTATTTGAAATGTTACTTATAGAGCATCTATAGATGGActatccaaaaaaaaaaaaaaagtgttacctCAAATACATTTGAGCATttgttttggcctgcctggctAAACCCTGCATTTAGTGAGCAGGATTTGCACTTTTGAGACATTTCTATTATTTTCATGgcaacaggcaagctcaatcatgCACAGCTAAAGAATTTCAAAATACTTAAAATAGTACTTGAAACCAGGTCTGATAGTTTGTACACCTGAATGGAACAAAACGTACCGCTCCGAACTTGGTAGGGGTGAGGTCTGGCACGAACGCCTCGGGGTAAATAGTATTCAGATACCAGGTGAAGTTCTTACACTGCAGCCTCTCCCTCAGATTCACACGCTCCGAGATGTCACCAAATCcttCTCCTTGGCCATCTTGGCAGCGTTACTGTTGCGTCGGTAGTAGATGTGTTTGTAGTCATCCATCCAGACCTCTGCGAGTCGTACCTGGTTCCTTGTGATGACCTCAGTACCTTTAGGGAAGGTGTGGGGTGACTTGGTACGGAACACGTGACCCACCACGGAACACGGAATGATCTCCAGCTGGCCGCCACACTGCCACACCCTAAAGGACATCTCCACATTCTCACCCCCCCAGATCTCCATCTTGTCATCGTACGTTCCGATGTGTTCAAAGTACTTCTTGGAGATGGAGAAGAGACCACCGGCAAACGTTGGAGTTTTGACGGGGTAGGTCTCGTCTTTGCGTCTGTTGCTCTCATGCTCGGGGATGCCTTCCCAGCCAAAGCTGAGGTTCCAGTCAAAGTTCCCTCTGTTGCGGGCCTTAGCGGTGGCTACAGGCTTGTTGAAGGTAAAGTCATTCAGGTTGATGGTAGTGATCTCTGGGCTGACCACGGCTGTTGGCTCCTCCACGATACGAGCCAGCAGGGGCTCCAGC

Function

NR:

description
polypeptide N-acetylgalactosaminyltransferase 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1568834 True 1463 TUCP 0.48 5 39529924 39535299

Neighbor

gene id symbol gene type direction distance location
LOC110491935 LOC106567011 coding downstream 196242 39309981 ~ 39333682 (-)
LOC110492900 NA coding downstream 310290 39218685 ~ 39219634 (-)
LOC110491931 LOC106567008 coding downstream 311742 39213698 ~ 39218182 (-)
LOC118939532 NA coding downstream 382079 39124872 ~ 39147845 (-)
si:dkey-157g16.6 LOC106567002 coding downstream 486021 39013363 ~ 39043903 (-)
zgc:158263 LOC106567014 coding upstream 16418 39551717 ~ 39563244 (-)
LOC110491945 LOC106567025 coding upstream 192614 39727913 ~ 39732807 (-)
LOC110491943 LOC106567023 coding upstream 198145 39733444 ~ 39751919 (-)
LOC110491953 NA coding upstream 426325 39961624 ~ 39992363 (-)
ribc1 ribc1 coding upstream 518010 40053309 ~ 40064572 (-)
G1373271 NA non-coding downstream 22628 39507012 ~ 39507296 (-)
G1373251 NA non-coding downstream 47172 39481992 ~ 39482752 (-)
G1373201 NA non-coding downstream 103462 39425796 ~ 39426462 (-)
G1373199 NA non-coding downstream 107845 39421837 ~ 39422079 (-)
G1373197 NA non-coding downstream 110072 39419593 ~ 39419852 (-)
G1373303 NA non-coding upstream 41656 39576955 ~ 39577272 (-)
G1373304 NA non-coding upstream 43080 39578379 ~ 39578595 (-)
G1373308 NA non-coding upstream 47612 39582911 ~ 39583123 (-)
G1373266 LOC106567016 non-coding upstream 51062 39586361 ~ 39587440 (-)
G1373313 LOC106567018 non-coding upstream 70126 39605425 ~ 39611203 (-)
G1373200 NA other downstream 107072 39422150 ~ 39422852 (-)
G1372979 NA other downstream 537704 38991592 ~ 38992220 (-)
G1372845 LOC106566999 other downstream 757047 38771628 ~ 38772877 (-)
G1371532 NA other downstream 1245858 38283408 ~ 38284066 (-)
G1373378 NA other upstream 184565 39719864 ~ 39720977 (-)
G1373490 LOC100380641 other upstream 404923 39940222 ~ 39943028 (-)
LOC110491948 LOC106567031 other upstream 547158 40080690 ~ 40119070 (-)
G1374237 LOC106567042 other upstream 987698 40522997 ~ 40525278 (-)
rps26 LOC106567051 other upstream 1317459 40852758 ~ 40854671 (-)

Expression

G1373226(LOC100380735) Expression in all Baseline Samples

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G1373226(LOC100380735) Expression in each Bioproject

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G1373226(LOC100380735) Expression in each Sample
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Co-expression Network