XLOC_032801


Basic Information

Item Value
gene id XLOC_032801
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20225437 ~ 20226644 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065131
agagggagactcacaagagcatcggtggagatttctctaaaaaatgctggagaACAGCAGTTGGGGTTTTGTTGGGGCTGTCTTTGTTTATTTGCagattggagtggagcagaagaagGAGAACGGTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTtcaaaagaaatgtattaaaattagttaaagacctgatatctttctctttgacaggttggcatggagcatgtgaaggaacagggaaacacactgtaatgacaagtgcatcgtaataaattaggtacagccttaaactttaagttgagtcaactgaactttataaaacattttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGTGAGTATAAGCAGGTGAGTTTATTGATGCAGATAATAAGTCCATTAACCTGAATTGGATATTTGATTATGCAGGCTTGGAGACTGGAGACGGATACCACAGACAGCAAACAGGATGAAGACTAAACGAGGAACCAGGAGACACCTCACTAGGAGAGACACTGGAACTCACAGGAGATGTGCTTGTGGTGCTTCAGTGAGTGGAAAACCTGGTCTTAATGGGGCAGTAAGTGGTTGTCAGATATTTCCTTCAGATAGACAGAAATagatacaatatttttgtttgtatgcttCATTTGTATATCGCTATCTAACTTAACATTTGcagattgttatttgttatatgatCGGATAAATTGATCTGTTCTAATTTATTTGTATGCTGTCAGAGTTACCACATTGAATATTACTGCACGTCTGTTGTCagatagattgtctggctgttgtattatttattagtaatttatgCTGTTGGCCTGTTCAACATTTGtagcttttgattgttttttgttttatttacagttttactaatTATTGTAGCACATTTATCTCTTCTAAGTTTATAGATTGTCATCTAGTAGAGTATTTACTTATAggtgtgaaatattatttgttagttttagaaCAGAACCAGACTGGAGACAATGGTAGATGAAACTTCCAAAGAATGGTATTAGATTAATGAATGACTTGACatctttctattgtattttacagATCAGATGGCACCACATGGAGAAAAgaaggaatcacacac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065131 True 1208 lncRNA 0.36 1 20225437 20226644

Neighbor

gene id symbol gene type direction distance location
XLOC_032799 BX537296.2 coding downstream 46904 20178436 ~ 20178533 (-)
XLOC_032798 BX537296.3 coding downstream 89281 20136059 ~ 20136156 (-)
XLOC_032797 ntn1a coding downstream 298780 19804048 ~ 19926657 (-)
XLOC_032796 CU929170.1 coding downstream 508896 19716423 ~ 19716541 (-)
XLOC_032795 cfap52 coding downstream 542031 19667619 ~ 19683406 (-)
XLOC_032802 NA coding upstream 57645 20284289 ~ 20432247 (-)
XLOC_032803 BX927341.1 coding upstream 72907 20299551 ~ 20299648 (-)
XLOC_032804 NA coding upstream 87647 20314291 ~ 20316167 (-)
XLOC_032805 NA coding upstream 101165 20327809 ~ 20332996 (-)
XLOC_032806 BX927341.2 coding upstream 110500 20337144 ~ 20337241 (-)
XLOC_032793 NA non-coding downstream 785278 19439100 ~ 19440159 (-)
XLOC_032792 CR387927.3 non-coding downstream 832460 19392860 ~ 19392977 (-)

Expression


Co-expression Network