XLOC_032804


Basic Information

Item Value
gene id XLOC_032804
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20314291 ~ 20316167 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064726
cttagtataatatacacgcgcttttttttctgtttctccgagtccgcctgacgaccgacctgtttctccggacctgtttctccgcctgACGGCGACCTGTTTCTCCGCCTGACGCCCGAGCTGTTGCTCCGCCTGACGCCCGAGCTGTTGCTCCGCCTAACGCCTGACCTGTGCTCGCCTCACGCCCGACCTGCTGCTCCGCCTCACAGCCAGCCTGTTGATCGGTGGACGGGAAAGCGCGCATGGCATCGGAAGGAGCTTGAAAAGTATAAGatggataattgcgtgaaaatcaaactaaaagaatgcaatcttgaggagttaatccccacatttgaagcacagGAGCGAACCTTTCCTCGTTTTTAGGTCAATTTGAATAGAATTCAGAGGGT
>TCONS_00064725
cttagtataatatacacgcgcttttttttctgtttctccgagtccgcctgacgaccgacctgtttctccggacctgtttctccgcctgACGGCGACCTGTTTCTCCGCCTGACGCCCGAGCTGTTGCTCCGCCTGACGCCCGAGCTGTTGCTCCGCCTAACGCCTGACCTGTGCTCGCCTCACGCCCGACCTGCTGCTCCGCCTCACAGCCAGCCTGTTGATCGGTGGACGGGAAAGCGCGCATGGCATCGGAAGGAGCTTGAAAAGTATAAGgtgatgacaatggataattgcgtgaaaatcaaactaaaagaatgcaatcttgaggagttaatccccacatttgaagcacagGAGCGAACCTTTCCTCGTTTTTAGGTCAATTTGAATAGAATTCAGAGGGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064726 False 395 lncRNA 0.53 3 20314291 20316167
TCONS_00064725 True 404 lncRNA 0.52 4 20314291 20316167

Neighbor

gene id symbol gene type direction distance location
XLOC_032803 BX927341.1 coding downstream 14643 20299551 ~ 20299648 (-)
XLOC_032801 NA coding downstream 87647 20225437 ~ 20226644 (-)
XLOC_032799 BX537296.2 coding downstream 135758 20178436 ~ 20178533 (-)
XLOC_032798 BX537296.3 coding downstream 178135 20136059 ~ 20136156 (-)
XLOC_032797 ntn1a coding downstream 387634 19804048 ~ 19926657 (-)
XLOC_032805 NA coding upstream 11642 20327809 ~ 20332996 (-)
XLOC_032806 BX927341.2 coding upstream 20977 20337144 ~ 20337241 (-)
XLOC_032807 NA coding upstream 43355 20359522 ~ 20360276 (-)
XLOC_032808 NA coding upstream 66286 20382453 ~ 20382910 (-)
XLOC_032809 NA coding upstream 67463 20383630 ~ 20384731 (-)
XLOC_032796 CU929170.1 non-coding downstream 597750 19716423 ~ 19716541 (-)

Expression


Co-expression Network