XLOC_032807


Basic Information

Item Value
gene id XLOC_032807
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20359522 ~ 20360276 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065135
ggcatggagcatgtggaggAACAGGGAAACGCACCTTAGTAATGACAAGTGCATCGTAATAAATTAGATACAGACTTACACTTTTTtaggttgaatcaaattaactttataaaacatttaaaatcatataCTTTCATTTGTACATACTAGATGATTGTCTGGAATCTCTTTAAGTCAGATAAATGTCTTGTTTGcggcaggtgtttctttttcctgtaatggacacacaacagacagaagaaggagactcacaagagcatcggtgGAGATTTGTCTGAAAACCGCTGGTTAACAGTTTATGCATTTctggagttcagcaagcatgtagagctctgttagttgtGTCTTTATCTTTTCCAGGCTGGAGTGCAGCATGTGTAGAcaaataggaatcacacacctcagcaatggacactgatggtcaggaATATCCTTTAAAGGCAGATGAatgggtgcatggatggatgttcttccaagtggaagggggtggtggtgggcatagattgttagatatATGTCTTGTCTGTGGCTATTATTTACAACTACAACAGGCAGAAGAGTCAGACTCACGAGCAAAATGGTGTATATTTATCTGAGGAACACTGGAGAACGTTTGGTTTATTGATGCAGATCATCCAGCAAGTAGAGCTTTGTTAGTCTTGTatttgtcttttgcagattagaCTGGGGCCTGTGGAGAAATGGGACTCGCACCTCAGCATGACTGGAAACTGATGgtctgggctgcgtttccc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065135 True 755 lncRNA 0.41 1 20359522 20360276

Neighbor

gene id symbol gene type direction distance location
XLOC_032806 BX927341.2 coding downstream 22281 20337144 ~ 20337241 (-)
XLOC_032805 NA coding downstream 26526 20327809 ~ 20332996 (-)
XLOC_032804 NA coding downstream 43355 20314291 ~ 20316167 (-)
XLOC_032803 BX927341.1 coding downstream 59874 20299551 ~ 20299648 (-)
XLOC_032801 NA coding downstream 132878 20225437 ~ 20226644 (-)
XLOC_032808 NA coding upstream 22177 20382453 ~ 20382910 (-)
XLOC_032809 NA coding upstream 23354 20383630 ~ 20384731 (-)
XLOC_032810 BX927341.5 coding upstream 49281 20409557 ~ 20409654 (-)
XLOC_032811 NA coding upstream 52832 20413108 ~ 20467743 (-)
XLOC_032812 NA coding upstream 76668 20436944 ~ 20437403 (-)

Expression


Co-expression Network