Gene
RNA
| Item | Value |
|---|---|
| gene id | G1373655 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 40227040 ~ 40227440 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1569305 | True | 401 | lncRNA | 0.58 | 1 | 40227040 | 40227440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| neurod4 | LOC106567036 | coding | downstream | 13626 | 40209982 ~ 40213414 (-) |
| LOC110491955 | LOC106567035 | coding | downstream | 33034 | 40181926 ~ 40194006 (-) |
| LOC110491951 | LOC106567033 | coding | downstream | 95632 | 40121155 ~ 40131408 (-) |
| LOC110491948 | LOC106567031 | coding | downstream | 107970 | 40080690 ~ 40119070 (-) |
| ribc1 | ribc1 | coding | downstream | 162468 | 40053309 ~ 40064572 (-) |
| LOC118939474 | LOC106572692 | coding | upstream | 10647 | 40238087 ~ 40239129 (-) |
| LOC110491958 | LOC106567039 | coding | upstream | 208618 | 40434504 ~ 40443364 (-) |
| slc26a10 | LOC106567041 | coding | upstream | 232390 | 40459830 ~ 40480813 (-) |
| arhgef25a | LOC106567043 | coding | upstream | 300487 | 40527927 ~ 40656367 (-) |
| kmt2d | kmt2d | coding | upstream | 498076 | 40725516 ~ 40769515 (-) |
| G1373637 | NA | non-coding | downstream | 47852 | 40176810 ~ 40179188 (-) |
| G1373621 | NA | non-coding | downstream | 82790 | 40144042 ~ 40144250 (-) |
| G1373620 | NA | non-coding | downstream | 83037 | 40143775 ~ 40144003 (-) |
| G1373617 | NA | non-coding | downstream | 85703 | 40141099 ~ 40141337 (-) |
| G1373612 | NA | non-coding | downstream | 97529 | 40128817 ~ 40129511 (-) |
| G1373656 | NA | non-coding | upstream | 2013 | 40229453 ~ 40229709 (-) |
| G1373685 | NA | non-coding | upstream | 64532 | 40291972 ~ 40350960 (-) |
| G1373689 | NA | non-coding | upstream | 137117 | 40364557 ~ 40377173 (-) |
| G1373717 | NA | non-coding | upstream | 152441 | 40379881 ~ 40380133 (-) |
| G1373723 | NA | non-coding | upstream | 156020 | 40383460 ~ 40383681 (-) |
| G1373490 | LOC100380641 | other | downstream | 284012 | 39940222 ~ 39943028 (-) |
| G1373378 | NA | other | downstream | 506063 | 39719864 ~ 39720977 (-) |
| G1373226 | LOC100380735 | other | downstream | 691741 | 39529924 ~ 39535299 (-) |
| G1373200 | NA | other | downstream | 804188 | 39422150 ~ 39422852 (-) |
| G1374237 | LOC106567042 | other | upstream | 295557 | 40522997 ~ 40525278 (-) |
| rps26 | LOC106567051 | other | upstream | 625318 | 40852758 ~ 40854671 (-) |
| G1374491 | LOC106567058 | other | upstream | 799335 | 41026775 ~ 41029406 (-) |
| G1375495 | NA | other | upstream | 1436308 | 41663748 ~ 41664049 (-) |
| LOC110492013 | LOC106567078 | other | upstream | 1627340 | 41852627 ~ 41857489 (-) |
