G1373685


Basic Information

Item Value
gene id G1373685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 40291972 ~ 40350960 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1569336
ATGTGGGAGGAGCAGACTCTAGCCATCAATTAAGGTCAGAGTTAGACCcgaccacacagagagaggagccatgAAGGACCAGAACAACATACTTCACGGCCTATGTGATTGTTATTCCTCCATGTCAGTGAAGAGCTACTCATATCTCCCTCAGCCCACAGTGGTCAGTTCATTTCCTTATGGATTGATAAGACTAACTGTATTAAAACATGGATGTAGTAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGATGTAGTAGAATGGATGTAGTAGAAAGGATGTGGTAGAATGGATGTGATAGAATGGATGTAATAGATTGGATGTGGTAGAATGGATGTGGTAGAATGGATGTAGTAGAATGGATGTGGTAGAATGGATGTGATAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGAGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTGGTAGAATGGAGTAGTAGAATGGATGTGGTAGAATGGAGTAGTAGAATGGATGTGGTAGAATGGAGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTGGTAGAATGGATGCGGTAGAATGGATGTAGTAGAATGGATGTAGTAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGATGTGGTAGAATGGATGTAGTAGAaaatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtatgtacaaatgagatgagtatgtaaacaaagtggcacagtttaaagtggctagtgatacatgtattacataaggatacagtcgatgatatagagtacagtatatacgtatgcatatgagatgaataatgtagggtaagtaacattatataaggtagcattgtttaaagtggctagtgatatatttacatcatttcccatcaattcccattattaaagtggctggagttgagtcagtgtcagtgtgttggcagcagccacccaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcattctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgatgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1569336 True 1587 lncRNA 0.41 2 40291972 40350960

Neighbor

gene id symbol gene type direction distance location
LOC118939474 LOC106572692 coding downstream 52843 40238087 ~ 40239129 (-)
neurod4 LOC106567036 coding downstream 78558 40209982 ~ 40213414 (-)
LOC110491955 LOC106567035 coding downstream 97966 40181926 ~ 40194006 (-)
LOC110491951 LOC106567033 coding downstream 160564 40121155 ~ 40131408 (-)
LOC110491948 LOC106567031 coding downstream 172902 40080690 ~ 40119070 (-)
LOC110491958 LOC106567039 coding upstream 85098 40434504 ~ 40443364 (-)
slc26a10 LOC106567041 coding upstream 108870 40459830 ~ 40480813 (-)
arhgef25a LOC106567043 coding upstream 176967 40527927 ~ 40656367 (-)
kmt2d kmt2d coding upstream 374556 40725516 ~ 40769515 (-)
dhh dhh coding upstream 422033 40772993 ~ 40778946 (-)
G1373656 NA non-coding downstream 62263 40229453 ~ 40229709 (-)
G1373655 NA non-coding downstream 64532 40227040 ~ 40227440 (-)
G1373637 NA non-coding downstream 112784 40176810 ~ 40179188 (-)
G1373621 NA non-coding downstream 147722 40144042 ~ 40144250 (-)
G1373620 NA non-coding downstream 147969 40143775 ~ 40144003 (-)
G1373689 NA non-coding upstream 13597 40364557 ~ 40377173 (-)
G1373717 NA non-coding upstream 28921 40379881 ~ 40380133 (-)
G1373723 NA non-coding upstream 32500 40383460 ~ 40383681 (-)
G1374230 NA non-coding upstream 156652 40507612 ~ 40507813 (-)
G1373490 LOC100380641 other downstream 348944 39940222 ~ 39943028 (-)
G1373378 NA other downstream 570995 39719864 ~ 39720977 (-)
G1373226 LOC100380735 other downstream 756673 39529924 ~ 39535299 (-)
G1373200 NA other downstream 869120 39422150 ~ 39422852 (-)
G1374237 LOC106567042 other upstream 172037 40522997 ~ 40525278 (-)
rps26 LOC106567051 other upstream 501798 40852758 ~ 40854671 (-)
G1374491 LOC106567058 other upstream 675815 41026775 ~ 41029406 (-)
G1375495 NA other upstream 1312788 41663748 ~ 41664049 (-)
LOC110492013 LOC106567078 other upstream 1503820 41852627 ~ 41857489 (-)

Expression


Co-expression Network