XLOC_032809


Basic Information

Item Value
gene id XLOC_032809
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20383630 ~ 20384731 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065137
GAGCAGAAGAAGGAGAACGGTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTtcaaaagaaatgtattaaaattagttaaagacctgatatctttctctttgacaggttggcatggagcatgtgaaggaacagggaaacacactgtaatgacaagtgcatcgtaataaattaggtacagccttaaactttaagttgagtcaactgaactttataaaacattttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGTGAGTATAAGCAGGTGAGTTTATTGATGCAGATAATAAGTCCATTAACCTGAATTGGATATTTGATTATGCAGGCTTGGAGACTGGAGACGGATACCACAGACAGCAAACAGGATGAAGACTAAACGAGGAACCAGGAGACACCTCACTAGGAGAGACACTGGAACTCACAGGAGATGTGCTTGTGGTGCTTCAGTGAGTGGAAAACCTGGTCTTAATGGGGCAGTAAGTGGTTGTCAGATATTTCCTTCAGATAGACAGAAATagatacaatatttttgtttgtatgcttCATTTGTATATCGCTATCTAACTTAACATTTGcagattgttatttgttatatgatCGGATAAATTGATCTGTTCTAATGTATTTGTATGCTGTCAGAGTTACCACATTGAATATTACTGCACGTCTGTTGTCagatagattgtctggctgttgtattatttattagtaatttatgCTGTTGGCCTGTTCAACATTTGtagcttttgattgttttttgttttatttacagttttactaatTATTGTAGCACATTTATCTCTTCTAAGTTTATAGATTGTCATCTAGTAGAGTATTTACTTATAggtgtgaaatattatttgttagttttagaaCAGAACCAGACTGGAGACAATGGTAGATGAAACTTCCAAAGAATGGTATTAGATTAATGAATGACTTGACatctttctattgtattttacagATCAGATGGCACCACATGGAGAAAAgaaggaatcacacac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065137 True 1102 lncRNA 0.36 1 20383630 20384731

Neighbor

gene id symbol gene type direction distance location
XLOC_032808 NA coding downstream 720 20382453 ~ 20382910 (-)
XLOC_032800 NA coding downstream 22897 20201328 ~ 20360733 (-)
XLOC_032807 NA coding downstream 23354 20359522 ~ 20360276 (-)
XLOC_032806 BX927341.2 coding downstream 46389 20337144 ~ 20337241 (-)
XLOC_032805 NA coding downstream 50634 20327809 ~ 20332996 (-)
XLOC_032810 BX927341.5 coding upstream 24826 20409557 ~ 20409654 (-)
XLOC_032811 NA coding upstream 28377 20413108 ~ 20467743 (-)
XLOC_032812 NA coding upstream 52213 20436944 ~ 20437403 (-)
XLOC_032813 NA coding upstream 53368 20438099 ~ 20439334 (-)
XLOC_032814 BX927341.4 coding upstream 79671 20464402 ~ 20464499 (-)

Expression


Co-expression Network