Gene
RNA
| Item | Value |
|---|---|
| gene id | G1374672 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 41185859 ~ 41241786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1570438 | True | 213 | lncRNA | 0.38 | 2 | 41185859 | 41241786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491981 | LOC106567057 | coding | downstream | 7521 | 41038562 ~ 41178338 (-) |
| wnt1 | LOC106567052 | coding | downstream | 312466 | 40866655 ~ 40873393 (-) |
| rps26 | LOC106567051 | coding | downstream | 331188 | 40852758 ~ 40854671 (-) |
| LOC110491969 | LOC106567048 | coding | downstream | 355231 | 40790495 ~ 40830628 (-) |
| dhh | dhh | coding | downstream | 406913 | 40772993 ~ 40778946 (-) |
| LOC110491989 | LOC106567063 | coding | upstream | 1179 | 41242965 ~ 41248039 (-) |
| mfsd5 | mfsd5 | coding | upstream | 8151 | 41249937 ~ 41253783 (-) |
| LOC110491987 | LOC106567064 | coding | upstream | 21044 | 41262830 ~ 41278997 (-) |
| calcoco1a | LOC106572538 | coding | upstream | 143800 | 41385586 ~ 41395668 (-) |
| cbx5 | LOC106567067 | coding | upstream | 396051 | 41637837 ~ 41645221 (-) |
| G1374414 | NA | non-coding | downstream | 300811 | 40884836 ~ 40885048 (-) |
| G1374406 | NA | non-coding | downstream | 321149 | 40864425 ~ 40864710 (-) |
| G1374328 | NA | non-coding | downstream | 334130 | 40851276 ~ 40851729 (-) |
| G1374325 | NA | non-coding | downstream | 340447 | 40844398 ~ 40845412 (-) |
| G1374320 | NA | non-coding | downstream | 396958 | 40787227 ~ 40788901 (-) |
| G1374704 | NA | non-coding | upstream | 15617 | 41257403 ~ 41259375 (-) |
| G1374755 | NA | non-coding | upstream | 75394 | 41317180 ~ 41318652 (-) |
| G1374790 | NA | non-coding | upstream | 122147 | 41363933 ~ 41400154 (-) |
| G1374850 | NA | non-coding | upstream | 214600 | 41456386 ~ 41456611 (-) |
| G1375395 | NA | non-coding | upstream | 240091 | 41481877 ~ 41482286 (-) |
| G1374491 | LOC106567058 | other | downstream | 156453 | 41026775 ~ 41029406 (-) |
| G1374237 | LOC106567042 | other | downstream | 660581 | 40522997 ~ 40525278 (-) |
| LOC110491948 | LOC106567031 | other | downstream | 1101033 | 40080690 ~ 40119070 (-) |
| G1373490 | LOC100380641 | other | downstream | 1242831 | 39940222 ~ 39943028 (-) |
| G1375495 | NA | other | upstream | 421962 | 41663748 ~ 41664049 (-) |
| LOC110492013 | LOC106567078 | other | upstream | 612994 | 41852627 ~ 41857489 (-) |
| LOC110492054 | LOC106567113 | other | upstream | 1311773 | 42548642 ~ 42569532 (-) |
| LOC110492059 | LOC106567118 | other | upstream | 1530520 | 42767849 ~ 42773348 (-) |
| LOC110491060 | LOC106567122 | other | upstream | 1877102 | 43117471 ~ 43124619 (-) |
