Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375479 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 41610117 ~ 41610357 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1571372 | True | 241 | lncRNA | 0.51 | 1 | 41610117 | 41610357 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| calcoco1a | LOC106572538 | coding | downstream | 214449 | 41385586 ~ 41395668 (-) |
| LOC110491987 | LOC106567064 | coding | downstream | 331120 | 41262830 ~ 41278997 (-) |
| mfsd5 | mfsd5 | coding | downstream | 356334 | 41249937 ~ 41253783 (-) |
| LOC110491989 | LOC106567063 | coding | downstream | 362078 | 41242965 ~ 41248039 (-) |
| LOC110491986 | LOC106567061 | coding | downstream | 369807 | 41230602 ~ 41240310 (-) |
| cbx5 | LOC106567067 | coding | upstream | 27480 | 41637837 ~ 41645221 (-) |
| nfe2 | LOC106567066 | coding | upstream | 38840 | 41649197 ~ 41657737 (-) |
| znf740b | LOC106567069 | coding | upstream | 77889 | 41688246 ~ 41697155 (-) |
| zgc:174906 | LOC106567072 | coding | upstream | 90038 | 41700395 ~ 41704276 (-) |
| spryd3 | LOC106567075 | coding | upstream | 120835 | 41729589 ~ 41814584 (-) |
| G1375396 | hoxc10aa | non-coding | downstream | 116040 | 41489002 ~ 41494077 (-) |
| G1375395 | NA | non-coding | downstream | 127831 | 41481877 ~ 41482286 (-) |
| G1374850 | NA | non-coding | downstream | 153506 | 41456386 ~ 41456611 (-) |
| G1374790 | NA | non-coding | downstream | 209963 | 41363933 ~ 41400154 (-) |
| G1374755 | NA | non-coding | downstream | 291465 | 41317180 ~ 41318652 (-) |
| G1375541 | NA | non-coding | upstream | 228069 | 41838426 ~ 41841200 (-) |
| G1375561 | NA | non-coding | upstream | 241679 | 41852036 ~ 41852546 (-) |
| G1375576 | NA | non-coding | upstream | 253875 | 41864232 ~ 41952990 (-) |
| G1375583 | LOC107714922 | non-coding | upstream | 275652 | 41886009 ~ 41887418 (-) |
| G1374491 | LOC106567058 | other | downstream | 580711 | 41026775 ~ 41029406 (-) |
| rps26 | LOC106567051 | other | downstream | 755528 | 40852758 ~ 40854671 (-) |
| G1374237 | LOC106567042 | other | downstream | 1084839 | 40522997 ~ 40525278 (-) |
| LOC110491948 | LOC106567031 | other | downstream | 1525291 | 40080690 ~ 40119070 (-) |
| G1373490 | LOC100380641 | other | downstream | 1667089 | 39940222 ~ 39943028 (-) |
| G1375495 | NA | other | upstream | 53391 | 41663748 ~ 41664049 (-) |
| LOC110492013 | LOC106567078 | other | upstream | 244423 | 41852627 ~ 41857489 (-) |
| LOC110492054 | LOC106567113 | other | upstream | 943202 | 42548642 ~ 42569532 (-) |
| LOC110492059 | LOC106567118 | other | upstream | 1161949 | 42767849 ~ 42773348 (-) |
| LOC110491060 | LOC106567122 | other | upstream | 1508531 | 43117471 ~ 43124619 (-) |
