Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 41851863 ~ 41852853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1570864 | False | 843 | lncRNA | 0.35 | 1 | 41851863 | 41852705 |
| TU1570863 | True | 819 | lncRNA | 0.32 | 1 | 41852035 | 41852853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gpr182 | LOC106567077 | coding | upstream | 1641 | 41845991 ~ 41850222 (+) |
| pip4k2ca | LOC106567076 | coding | upstream | 13644 | 41824048 ~ 41838219 (+) |
| igfbp6b | igfbp-6b2 | coding | upstream | 31283 | 41743735 ~ 41820580 (+) |
| lima1a | LOC106567074 | coding | upstream | 123666 | 41714511 ~ 41728197 (+) |
| LOC110492004 | copz1 | coding | upstream | 174995 | 41666524 ~ 41676868 (+) |
| tspan31 | LOC106567080 | coding | downstream | 33158 | 41886011 ~ 41898541 (+) |
| LOC110492016 | LOC106567081 | coding | downstream | 54094 | 41906947 ~ 41915037 (+) |
| LOC110492017 | LOC106567082 | coding | downstream | 73353 | 41926206 ~ 41936644 (+) |
| LOC110492020 | LOC106567083 | coding | downstream | 85558 | 41938411 ~ 41952996 (+) |
| LOC110492021 | LOC106567086 | coding | downstream | 100351 | 41953204 ~ 41961861 (+) |
| G1375035 | NA | non-coding | upstream | 7910 | 41843653 ~ 41843953 (+) |
| G1374994 | NA | non-coding | upstream | 140705 | 41710877 ~ 41711158 (+) |
| G1374966 | NA | non-coding | upstream | 185898 | 41665711 ~ 41665965 (+) |
| G1374964 | NA | non-coding | upstream | 186871 | 41664683 ~ 41664992 (+) |
| G1374963 | NA | non-coding | upstream | 188093 | 41663491 ~ 41663770 (+) |
| G1375087 | NA | non-coding | downstream | 127485 | 41980338 ~ 41980624 (+) |
| G1375088 | NA | non-coding | downstream | 128365 | 41981218 ~ 41981449 (+) |
| G1374558 | LOC106567063 | other | upstream | 603907 | 41244857 ~ 41247956 (+) |
| LOC110491970 | LOC106567050 | other | upstream | 1008378 | 40836057 ~ 40844169 (+) |
| tac3a | tac3 | other | upstream | 1414735 | 40431869 ~ 40437128 (+) |
| znf385a | LOC106567037 | other | upstream | 1488528 | 40265875 ~ 40377336 (+) |
| G1372542 | NA | other | upstream | 1657512 | 40193812 ~ 40194351 (+) |
| G1375085 | LOC106567084 | other | downstream | 124671 | 41977524 ~ 41979064 (+) |
| G1375104 | kansl2 | other | downstream | 161647 | 42014500 ~ 42019534 (+) |
| G1375141 | tuba2 | other | downstream | 256771 | 42109624 ~ 42123709 (+) |
| LOC110492034 | LOC106567099 | other | downstream | 401179 | 42253795 ~ 42273351 (+) |
| G1376241 | LOC106567118 | other | downstream | 914933 | 42767786 ~ 42768745 (+) |
