G1375582



Basic Information


Item Value
gene id G1375582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 41891486 ~ 41895597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1571495
CTTAGTATGAGCAGAAGGACACATGTATTACAAGTACAACTATTTCCAGGTAGTATTTTGCAGGAACATGCATTACAAGGACAGCCAACCCTTACAGCATTGCAGCTGAACCAGTCCTGGGTAAACTGCCTCTGACCGAGGGTGTTGTTGAGCAGGCCACAGCAGTCCAGCCGGCCCTCCAGCTCTCCCTTGGTGTTGTTGCTCATCAGACTCCAGGTGGAGTTCAGCAGCTTCTcctggaaagagagagggcgtataataataatactactaatgccatttagcagatgcttttatccaaagcgacttattgtcatgagtgcatacatttttttggagGCCCCGGTGGGAATCGAATCCATGATGATTTGcaattgca

Function


NR:

description
tetraspanin-31-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1571495 True 379 lncRNA 0.47 2 41891486 41895597

Neighbor


gene id symbol gene type direction distance location
LOC110492014 LOC106567079 coding downstream 11681 41862386 ~ 41879805 (-)
LOC110492013 LOC106567078 coding downstream 33997 41852627 ~ 41857489 (-)
spryd3 LOC106567075 coding downstream 76902 41729589 ~ 41814584 (-)
zgc:174906 LOC106567072 coding downstream 187210 41700395 ~ 41704276 (-)
znf740b LOC106567069 coding downstream 194331 41688246 ~ 41697155 (-)
LOC110492019 LOC106567084 coding upstream 66342 41961939 ~ 42014000 (-)
LOC100301771 parp3 coding upstream 118794 42014391 ~ 42017835 (-)
LOC118939612 NA coding upstream 124629 42020226 ~ 42020361 (-)
LOC110492022 ccnt1 coding upstream 150552 42046149 ~ 42054227 (-)
LOC110492023 LOC106567088 coding upstream 164396 42059993 ~ 42064731 (-)
G1375583 LOC107714922 non-coding downstream 4068 41886009 ~ 41887418 (-)
G1375561 NA non-coding downstream 38940 41852036 ~ 41852546 (-)
G1375541 NA non-coding downstream 50286 41838426 ~ 41841200 (-)
G1375479 NA non-coding downstream 281129 41610117 ~ 41610357 (-)
G1375600 NA non-coding upstream 27786 41923383 ~ 41967093 (-)
G1375574 NA non-coding upstream 43027 41938624 ~ 41947710 (-)
G1375573 LOC106567083 non-coding upstream 52732 41948329 ~ 41951670 (-)
G1375626 NA non-coding upstream 88187 41983784 ~ 41984090 (-)
G1375627 NA non-coding upstream 88784 41984381 ~ 41984608 (-)
G1375495 NA other downstream 227437 41663748 ~ 41664049 (-)
G1374491 LOC106567058 other downstream 862080 41026775 ~ 41029406 (-)
rps26 LOC106567051 other downstream 1036897 40852758 ~ 40854671 (-)
G1374237 LOC106567042 other downstream 1366208 40522997 ~ 40525278 (-)
LOC110492054 LOC106567113 other upstream 657962 42548642 ~ 42569532 (-)
LOC110492059 LOC106567118 other upstream 876709 42767849 ~ 42773348 (-)
LOC110491060 LOC106567122 other upstream 1223291 43117471 ~ 43124619 (-)
G1376748 NA other upstream 1263915 43159512 ~ 43170042 (-)
LOC110492063 LOC106567124 other upstream 1322212 43217803 ~ 43243705 (-)

Expression



Co-expression Network