Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375088 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 41981218 ~ 41981449 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1570921 | True | 232 | lncRNA | 0.44 | 1 | 41981218 | 41981449 |
41,978,000
41,978,400
41,978,800
41,979,200
41,979,600
41,980,000
41,980,400
41,980,800
41,981,200
41,981,600
41,982,000
41,982,400
NC_048580.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492021 | LOC106567086 | coding | upstream | 19357 | 41953204 ~ 41961861 (+) |
| LOC110492020 | LOC106567083 | coding | upstream | 28222 | 41938411 ~ 41952996 (+) |
| LOC110492017 | LOC106567082 | coding | upstream | 44574 | 41926206 ~ 41936644 (+) |
| LOC110492016 | LOC106567081 | coding | upstream | 66181 | 41906947 ~ 41915037 (+) |
| tspan31 | LOC106567080 | coding | upstream | 82677 | 41886011 ~ 41898541 (+) |
| LOC118939537 | NA | coding | downstream | 86611 | 42068060 ~ 42072174 (+) |
| LOC118939475 | NA | coding | downstream | 90876 | 42072325 ~ 42078626 (+) |
| pmelb | LOC106567089 | coding | downstream | 97789 | 42079238 ~ 42085056 (+) |
| LOC110491058 | LOC105016959 | coding | downstream | 119021 | 42100470 ~ 42112185 (+) |
| LOC110492026 | LOC106567091 | coding | downstream | 131484 | 42112933 ~ 42120574 (+) |
| G1375087 | NA | non-coding | upstream | 594 | 41980338 ~ 41980624 (+) |
| G1375037 | NA | non-coding | upstream | 128365 | 41851863 ~ 41852853 (+) |
| G1375089 | NA | non-coding | downstream | 569 | 41982018 ~ 41982237 (+) |
| G1375094 | NA | non-coding | downstream | 15500 | 41996949 ~ 41997220 (+) |
| G1375095 | NA | non-coding | downstream | 16609 | 41998058 ~ 41998283 (+) |
| G1375097 | NA | non-coding | downstream | 20579 | 42002028 ~ 42002436 (+) |
| G1375123 | NA | non-coding | downstream | 72953 | 42054402 ~ 42054654 (+) |
| G1375085 | LOC106567084 | other | upstream | 2154 | 41977524 ~ 41979064 (+) |
| G1374558 | LOC106567063 | other | upstream | 733262 | 41244857 ~ 41247956 (+) |
| LOC110491970 | LOC106567050 | other | upstream | 1137733 | 40836057 ~ 40844169 (+) |
| tac3a | tac3 | other | upstream | 1544090 | 40431869 ~ 40437128 (+) |
| znf385a | LOC106567037 | other | upstream | 1617883 | 40265875 ~ 40377336 (+) |
| G1375104 | kansl2 | other | downstream | 33051 | 42014500 ~ 42019534 (+) |
| G1375141 | tuba2 | other | downstream | 128175 | 42109624 ~ 42123709 (+) |
| LOC110492034 | LOC106567099 | other | downstream | 272583 | 42253795 ~ 42273351 (+) |
| G1376241 | LOC106567118 | other | downstream | 786337 | 42767786 ~ 42768745 (+) |
| pfd4 | pfd4 | other | downstream | 1028054 | 43009496 ~ 43011939 (+) |
