Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375639 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 42009541 ~ 42009783 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1571571 | True | 243 | lncRNA | 0.40 | 1 | 42009541 | 42009783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492014 | LOC106567079 | coding | downstream | 129736 | 41862386 ~ 41879805 (-) |
| LOC110492013 | LOC106567078 | coding | downstream | 152052 | 41852627 ~ 41857489 (-) |
| spryd3 | LOC106567075 | coding | downstream | 194957 | 41729589 ~ 41814584 (-) |
| zgc:174906 | LOC106567072 | coding | downstream | 305265 | 41700395 ~ 41704276 (-) |
| znf740b | LOC106567069 | coding | downstream | 312386 | 41688246 ~ 41697155 (-) |
| LOC100301771 | parp3 | coding | upstream | 4608 | 42014391 ~ 42017835 (-) |
| LOC118939612 | NA | coding | upstream | 10443 | 42020226 ~ 42020361 (-) |
| LOC110492022 | ccnt1 | coding | upstream | 36366 | 42046149 ~ 42054227 (-) |
| LOC110492023 | LOC106567088 | coding | upstream | 50210 | 42059993 ~ 42064731 (-) |
| LOC110492025 | LOC105013598 | coding | upstream | 75278 | 42085061 ~ 42088234 (-) |
| G1375632 | NA | non-coding | downstream | 10220 | 41999093 ~ 41999321 (-) |
| G1375631 | NA | non-coding | downstream | 11463 | 41997850 ~ 41998078 (-) |
| G1375630 | NA | non-coding | downstream | 12325 | 41996925 ~ 41997216 (-) |
| G1375627 | NA | non-coding | downstream | 24933 | 41984381 ~ 41984608 (-) |
| G1375626 | NA | non-coding | downstream | 25451 | 41983784 ~ 41984090 (-) |
| G1375664 | NA | non-coding | upstream | 65897 | 42075680 ~ 42075954 (-) |
| G1375665 | NA | non-coding | upstream | 66427 | 42076210 ~ 42076427 (-) |
| LOC118939538 | NA | non-coding | upstream | 88334 | 42098117 ~ 42230765 (-) |
| G1375674 | tuba2 | non-coding | upstream | 99689 | 42109472 ~ 42123715 (-) |
| G1375731 | NA | non-coding | upstream | 175946 | 42185729 ~ 42185955 (-) |
| G1375495 | NA | other | downstream | 345492 | 41663748 ~ 41664049 (-) |
| G1374491 | LOC106567058 | other | downstream | 980135 | 41026775 ~ 41029406 (-) |
| rps26 | LOC106567051 | other | downstream | 1154952 | 40852758 ~ 40854671 (-) |
| G1374237 | LOC106567042 | other | downstream | 1484263 | 40522997 ~ 40525278 (-) |
| LOC110492054 | LOC106567113 | other | upstream | 543776 | 42548642 ~ 42569532 (-) |
| LOC110492059 | LOC106567118 | other | upstream | 762523 | 42767849 ~ 42773348 (-) |
| LOC110491060 | LOC106567122 | other | upstream | 1109105 | 43117471 ~ 43124619 (-) |
| G1376748 | NA | other | upstream | 1149729 | 43159512 ~ 43170042 (-) |
| LOC110492063 | LOC106567124 | other | upstream | 1208026 | 43217803 ~ 43243705 (-) |
