XLOC_032816


Basic Information

Item Value
gene id XLOC_032816
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20492143 ~ 20493378 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065142
agagggagactcacaagagcatcggtggagatttctctaaaaaatgctggagaACAGCAGTTGGGGTTTTGTTGGGGCTGTCTTTGTTTATTTGCagattggagtggagcagaagaagGAGAACGGTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTTCAAAAGAAATGTATTAAGATTAGTtaaagacctgatatctttctctttgacaggttggcatggagcatgtgaaggaacagggaaacacactgtaatgacaagtgcatcgtaataaattaggtacagccttaaactttaagttgagtcaactgaactttataaaacattttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGTGAGTATAAGCAGGTGAGTTTATTGATGCAGATAATAAGTCCATTAACCTGAATTGGATATTTGATTATGCAGGCTTGGAGACTGGAGACGGATACCACAGACAGCAAACAGGATGAAGACTAAACGAGGAACCAGGAGACACCTCACTAGGAGAGACACTGGAACTCACAGGAGATGTGCTTGTGGTGCTTCAGTGAGTGGAAAACCTGGTCTTAATGGGGCAGTAAGTGGTTGTCAGATATTTCCTTCAGATAGACAGAAATagatacaatatttttgtttgtttgtatgattCAATTGTATATCGCTATCTAACTTAACATTTGcagattgttatttgttatatgatCGGATAAATTGATCTGTTCTAATTTATTTGTATGCTGTCAGAGTTACCACATTGAATATTACTGCACGTCTGTTGTCagatagattgtctggctgttgtattatttattagtaatttatgCTGTTGGCCTGTTCAACATTTGtagcttttgattgttttttgttttatttacagttttactaatTATTGTAGCACATTTATCTCTTCTAAGTTTATAGATTGTCATCTAGTAGAGTATTTACTTATAggtgtgaaatattatttgttagttttagaaCAGAACCAGACTGGAGACAATGGTAGATGAAACTTCCAAAGAATGGTATTAGATTAATGAATGACTTGACatctttctattgtattttacagATCAGATGGCACCACATGGAGAAAAgaaggaatcacacacctcagcaacgACTGGATGGTcagg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065142 True 1236 lncRNA 0.37 1 20492143 20493378

Neighbor

gene id symbol gene type direction distance location
XLOC_032815 NA coding downstream 696 20490988 ~ 20491447 (-)
XLOC_032811 NA coding downstream 24400 20413108 ~ 20467743 (-)
XLOC_032814 BX927341.4 coding downstream 27644 20464402 ~ 20464499 (-)
XLOC_032813 NA coding downstream 52809 20438099 ~ 20439334 (-)
XLOC_032812 NA coding downstream 54740 20436944 ~ 20437403 (-)
XLOC_032817 NA coding upstream 44421 20537799 ~ 20538169 (-)
XLOC_032818 NA coding upstream 69655 20563033 ~ 20564119 (-)
XLOC_032819 NA coding upstream 116814 20610192 ~ 20613182 (-)
XLOC_032820 LO018113.1 coding upstream 153849 20647227 ~ 20647333 (-)
XLOC_032821 col18a1b coding upstream 185512 20678890 ~ 20707846 (-)
XLOC_032824 NA non-coding upstream 519228 21012606 ~ 21013047 (-)

Expression


Co-expression Network