Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375831 |
| gene name | LOC106567105 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 42378286 ~ 42378530 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| inter-alpha-trypsin inhibitor heavy chain H6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1571782 | True | 245 | lncRNA | 0.60 | 1 | 42378286 | 42378530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492036 | LOC106567102 | coding | downstream | 20712 | 42331636 ~ 42357574 (-) |
| LOC100136795 | LOC106567100 | coding | downstream | 67107 | 42276720 ~ 42311179 (-) |
| LOC118939538 | NA | coding | downstream | 147521 | 42098117 ~ 42230765 (-) |
| LOC110492030 | LOC106567094 | coding | downstream | 201813 | 42174010 ~ 42176473 (-) |
| LOC110492028 | jph2 | coding | downstream | 228003 | 42149345 ~ 42150283 (-) |
| LOC110492045 | LOC106567106 | coding | upstream | 8706 | 42387236 ~ 42398873 (-) |
| LOC110492048 | taf8 | coding | upstream | 30824 | 42409354 ~ 42415213 (-) |
| LOC110492049 | LOC106572624 | coding | upstream | 36710 | 42415240 ~ 42416592 (-) |
| LOC110492050 | LOC106567110 | coding | upstream | 41685 | 42420215 ~ 42430379 (-) |
| LOC110492051 | LOC106567111 | coding | upstream | 67243 | 42445773 ~ 42468841 (-) |
| G1375828 | NA | non-coding | downstream | 7690 | 42370261 ~ 42370596 (-) |
| G1375827 | NA | non-coding | downstream | 9439 | 42368527 ~ 42368847 (-) |
| G1375731 | NA | non-coding | downstream | 192331 | 42185729 ~ 42185955 (-) |
| G1375674 | tuba2 | non-coding | downstream | 254571 | 42109472 ~ 42123715 (-) |
| G1375832 | NA | non-coding | upstream | 105 | 42378635 ~ 42378931 (-) |
| G1375833 | NA | non-coding | upstream | 1719 | 42380249 ~ 42380572 (-) |
| G1375841 | LOC106567107 | non-coding | upstream | 21425 | 42399955 ~ 42406935 (-) |
| G1375845 | NA | non-coding | upstream | 28508 | 42407038 ~ 42407894 (-) |
| G1375853 | NA | non-coding | upstream | 54450 | 42432980 ~ 42433428 (-) |
| LOC110492013 | LOC106567078 | other | downstream | 522925 | 41852627 ~ 41857489 (-) |
| G1375495 | NA | other | downstream | 714237 | 41663748 ~ 41664049 (-) |
| G1374491 | LOC106567058 | other | downstream | 1348880 | 41026775 ~ 41029406 (-) |
| rps26 | LOC106567051 | other | downstream | 1523697 | 40852758 ~ 40854671 (-) |
| G1374237 | LOC106567042 | other | downstream | 1853008 | 40522997 ~ 40525278 (-) |
| LOC110492054 | LOC106567113 | other | upstream | 175029 | 42548642 ~ 42569532 (-) |
| LOC110492059 | LOC106567118 | other | upstream | 393776 | 42767849 ~ 42773348 (-) |
| LOC110491060 | LOC106567122 | other | upstream | 740358 | 43117471 ~ 43124619 (-) |
| G1376748 | NA | other | upstream | 780982 | 43159512 ~ 43170042 (-) |
| LOC110492063 | LOC106567124 | other | upstream | 839279 | 43217803 ~ 43243705 (-) |
