XLOC_032817


Basic Information

Item Value
gene id XLOC_032817
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20537799 ~ 20538169 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065143
ggtgCAGTTGAGGGGGGCTCGTGGCCCAGTAGAGCTTTACCCCTGAGACTAACAAGGGGAACAGTGGAGATAAACTGGAAGACCTGGAGCTCGGCAAAgaggtagaactgcttgaacagactgaaaAATGGAGTTAGTTTCCAAAGAAATTTATTGAGATTAATTAtagacctgatatctttctctttggcagattTGTACGAAGCATGTGGAAGAACAGGGAAACACACCTCAGTAATCACAAGTGCATCATAATAAATTAGGTacagccttacatttttaagttgaatcaaattaacttcatcaaacattttaatttacatatttatatttttacagagtGATAGTCGGGTATTTTCtttggacggacg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065143 True 371 lncRNA 0.39 1 20537799 20538169

Neighbor

gene id symbol gene type direction distance location
XLOC_032816 NA coding downstream 44421 20492143 ~ 20493378 (-)
XLOC_032815 NA coding downstream 46352 20490988 ~ 20491447 (-)
XLOC_032811 NA coding downstream 70056 20413108 ~ 20467743 (-)
XLOC_032818 NA coding upstream 24864 20563033 ~ 20564119 (-)
XLOC_032819 NA coding upstream 72023 20610192 ~ 20613182 (-)
XLOC_032820 LO018113.1 coding upstream 109058 20647227 ~ 20647333 (-)
XLOC_032821 col18a1b coding upstream 140721 20678890 ~ 20707846 (-)
XLOC_032822 tns1a coding upstream 226679 20764848 ~ 20875111 (-)
XLOC_032824 NA non-coding upstream 474437 21012606 ~ 21013047 (-)
XLOC_032825 NA non-coding upstream 492272 21030441 ~ 21030708 (-)

Expression


Co-expression Network