XLOC_032818


Basic Information

Item Value
gene id XLOC_032818
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 20563033 ~ 20564119 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065144
aacagTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTTCAAAAGAAATGTATTAAGATTAGTtaaagacctgatatctttctctttgacaggttggcatggagcatgtgaaggaacagggaaacacactgtaatgacaagtgcatcgtaataaattaggtacagccttaaactttaagttgagtcaactgaactttataaaacattttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGTGAGTATAAGCAGGTGAGTTTATTGATGCAGATAATAAGTCCATTAACCTGAATTGGATATTTGATTATGCAGGCTTGGAGACTGGAGACGGATACCACAGACAGCAAACAGGATGAAGACTAAACGAGGAACCAGGAGACACCTCACTAGGAGAGACACTGGAACTCACAGGAGATGTGCTTGTGGTGCTTCAGTGAGTGGAAAACCTGGTCTTAATGGGGCAGTAAGTGGTTGTCAGATATTTCCTTCAGATAGACAGAAATagatacaatatttttgtttgtatgcttCATTTGTATATCGCTATCTAACTTAACATTTGcagattgttatttgttatatgatCGGATAAATTGATCTGTTCTAATTTATTTGTATGCTGTCAGAGTTACCACATTGAATATTACTGCACGTCTGTTGTCagatagattgtctggctgttgtattatttattagtaatttatgCTGTTGGCCTGTTCAACATTTGtagcttttgattgttttttgttttatttacagttttactaatTATTGTTGCACATTTATCTCTTCTAAGTTTATAGATTGTCATCTAGTAGAGTATTTACTTATAggtgtgaaatattatttgttagttttagaaCAGAACCAGACTGGAGACAATGGTAGATGAAACTTCCAAAGAATGGTATTAGATTAATGAATGACTTGACatctttctattgtattttacagATCAGATGGCACCACATGGAGAAAAgaaggaatcacacac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065144 True 1087 lncRNA 0.35 1 20563033 20564119

Neighbor

gene id symbol gene type direction distance location
XLOC_032817 NA coding downstream 24864 20537799 ~ 20538169 (-)
XLOC_032816 NA coding downstream 69655 20492143 ~ 20493378 (-)
XLOC_032815 NA coding downstream 71586 20490988 ~ 20491447 (-)
XLOC_032814 BX927341.4 coding downstream 98534 20464402 ~ 20464499 (-)
XLOC_032813 NA coding downstream 123699 20438099 ~ 20439334 (-)
XLOC_032819 NA coding upstream 46073 20610192 ~ 20613182 (-)
XLOC_032820 LO018113.1 coding upstream 83108 20647227 ~ 20647333 (-)
XLOC_032821 col18a1b coding upstream 114771 20678890 ~ 20707846 (-)
XLOC_032822 tns1a coding upstream 200729 20764848 ~ 20875111 (-)
XLOC_032823 igfbp2a coding upstream 357423 20921542 ~ 20952187 (-)
XLOC_032824 NA non-coding upstream 448487 21012606 ~ 21013047 (-)
XLOC_032825 NA non-coding upstream 466322 21030441 ~ 21030708 (-)
XLOC_032829 NA non-coding upstream 932360 21496479 ~ 21498035 (-)

Expression


Co-expression Network