Gene
RNA
| Item | Value |
|---|---|
| gene id | G1376222 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 42753200 ~ 42753422 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1572201 | True | 223 | lncRNA | 0.39 | 1 | 42753200 | 42753422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492058 | LOC106567117 | coding | downstream | 27583 | 42714241 ~ 42725617 (-) |
| LOC110492057 | LOC106567116 | coding | downstream | 39304 | 42674355 ~ 42713896 (-) |
| LOC110492056 | LOC106567114 | coding | downstream | 89392 | 42615407 ~ 42663808 (-) |
| LOC110492054 | LOC106567113 | coding | downstream | 183668 | 42548642 ~ 42569532 (-) |
| src | LOC106567112 | coding | downstream | 226295 | 42475699 ~ 42526905 (-) |
| LOC110492059 | LOC106567118 | coding | upstream | 14427 | 42767849 ~ 42773348 (-) |
| LOC110492061 | LOC106567120 | coding | upstream | 214737 | 42968159 ~ 42975719 (-) |
| LOC110492062 | LOC106567121 | coding | upstream | 232460 | 42985882 ~ 43000895 (-) |
| LOC110491060 | LOC106567122 | coding | upstream | 364049 | 43117471 ~ 43124619 (-) |
| LOC110492905 | LOC106567327 | coding | upstream | 457492 | 43210914 ~ 43212485 (-) |
| G1376216 | NA | non-coding | downstream | 4375 | 42748625 ~ 42748825 (-) |
| G1376214 | NA | non-coding | downstream | 5436 | 42747539 ~ 42747764 (-) |
| G1376105 | NA | non-coding | downstream | 138990 | 42613695 ~ 42614210 (-) |
| G1375935 | NA | non-coding | downstream | 205346 | 42547638 ~ 42547854 (-) |
| G1376228 | NA | non-coding | upstream | 5279 | 42758701 ~ 42758913 (-) |
| G1376504 | NA | non-coding | upstream | 169528 | 42922950 ~ 42923210 (-) |
| G1376535 | NA | non-coding | upstream | 223503 | 42976925 ~ 42977140 (-) |
| G1376540 | NA | non-coding | upstream | 229877 | 42983299 ~ 42983517 (-) |
| LOC110492013 | LOC106567078 | other | downstream | 897839 | 41852627 ~ 41857489 (-) |
| G1375495 | NA | other | downstream | 1089151 | 41663748 ~ 41664049 (-) |
| G1374491 | LOC106567058 | other | downstream | 1723794 | 41026775 ~ 41029406 (-) |
| rps26 | LOC106567051 | other | downstream | 1898611 | 40852758 ~ 40854671 (-) |
| G1376748 | NA | other | upstream | 406090 | 43159512 ~ 43170042 (-) |
| LOC110492063 | LOC106567124 | other | upstream | 464387 | 43217803 ~ 43243705 (-) |
| G1376991 | NA | other | upstream | 584077 | 43337162 ~ 43338555 (-) |
