Gene
RNA
| Item | Value |
|---|---|
| gene id | G1376996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 43352257 ~ 43352486 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger and BTB domain-containing protein 48-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1573069 | True | 230 | lncRNA | 0.55 | 1 | 43352257 | 43352486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nol9 | nol9 | coding | downstream | 4509 | 43340635 ~ 43347748 (-) |
| LOC110492064 | LOC106567125 | coding | downstream | 25757 | 43253172 ~ 43326500 (-) |
| LOC110492063 | LOC106567124 | coding | downstream | 108552 | 43217803 ~ 43243705 (-) |
| LOC110492905 | LOC106567327 | coding | downstream | 139772 | 43210914 ~ 43212485 (-) |
| LOC110491060 | LOC106567122 | coding | downstream | 227638 | 43117471 ~ 43124619 (-) |
| LOC110492067 | klhl21 | coding | upstream | 4009 | 43356495 ~ 43375265 (-) |
| LOC110492068 | LOC106567131 | coding | upstream | 144696 | 43497182 ~ 43503930 (-) |
| LOC110492069 | LOC106567132 | coding | upstream | 182208 | 43534694 ~ 43564442 (-) |
| LOC110492071 | LOC106567135 | coding | upstream | 226050 | 43578536 ~ 43599139 (-) |
| LOC110492072 | cenb5 | coding | upstream | 250607 | 43603093 ~ 43712334 (-) |
| G1376995 | NA | non-coding | downstream | 233 | 43351286 ~ 43352024 (-) |
| G1376994 | zbtb48 | non-coding | downstream | 2387 | 43349570 ~ 43349870 (-) |
| G1376993 | zbtb48 | non-coding | downstream | 3304 | 43348157 ~ 43348953 (-) |
| G1376991 | NA | non-coding | downstream | 13702 | 43337162 ~ 43338555 (-) |
| G1376901 | NA | non-coding | downstream | 61503 | 43221431 ~ 43290754 (-) |
| G1376992 | zbtb48 | non-coding | upstream | 395 | 43352881 ~ 43354500 (-) |
| G1377011 | LOC100136012 | non-coding | upstream | 36921 | 43389407 ~ 43389711 (-) |
| G1377018 | NA | non-coding | upstream | 41996 | 43394482 ~ 43394875 (-) |
| G1377026 | NA | non-coding | upstream | 47089 | 43399575 ~ 43400203 (-) |
| G1376748 | NA | other | downstream | 182215 | 43159512 ~ 43170042 (-) |
| LOC110492059 | LOC106567118 | other | downstream | 578961 | 42767849 ~ 42773348 (-) |
| G1377482 | NA | other | upstream | 339834 | 43692320 ~ 43692838 (-) |
| G1378530 | NA | other | upstream | 1200528 | 44553014 ~ 44553547 (-) |
| plxna2 | LOC106567158 | other | upstream | 1565527 | 44621739 ~ 44964691 (-) |
| slc48a1a | LOC106567162 | other | upstream | 1963461 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 2265731 | 45613938 ~ 45627786 (-) |
