XLOC_032824



Basic Information


Item Value
gene id XLOC_032824
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 21012606 ~ 21013047 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064731
ATGACCACTCTTCTGATGCTGCACCTGGTCACTTCACGTATTATTTTCAGCCCTCTTTGGACAGCCAGGAATCTGTCATCACTTCTGCACACTTCTGGTTCTATGCCGGAGAGGCCTAAAATTCCATGGTCACCAGATGCCATTGAAAATCTCAAAAGACCTGCATCTCAGGGCACTGACTGCAGAAGAGAGCAGATAGAAATCTCTTTTGAAGACCTTGGATGGAACAACTGGATTGTTCATCCTAAATCATTCACCTTCTACTACTGCCATGGCAACTGCTCCAGCGCTGAACGCATCACCACCATTTTTGGGATCACCCAGTGCTGCGCTCCTGTTCCAGAGAGCATGAAGTCACTCAGTTTCACCACCACCTCAGACGGGGGATACTCATTCAAATATAAGACCCTGCCTAACATCATACCAGAAGAGTGCAACTGCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064731 True 442 lncRNA 0.48 1 21012606 21013047

Neighbor


gene id symbol gene type direction distance location
XLOC_032823 igfbp2a coding downstream 60419 20921542 ~ 20952187 (-)
XLOC_032822 tns1a coding downstream 137495 20764848 ~ 20875111 (-)
XLOC_032821 col18a1b coding downstream 304760 20678890 ~ 20707846 (-)
XLOC_032820 LO018113.1 coding downstream 365273 20647227 ~ 20647333 (-)
XLOC_032819 NA coding downstream 399424 20610192 ~ 20613182 (-)
XLOC_032825 NA coding upstream 17394 21030441 ~ 21030708 (-)
XLOC_032826 inha coding upstream 55736 21068783 ~ 21091948 (-)
XLOC_032827 obsl1a coding upstream 144148 21157195 ~ 21189295 (-)
XLOC_032828 cacng1a coding upstream 457214 21470261 ~ 21492752 (-)
XLOC_032829 NA coding upstream 483432 21496479 ~ 21498035 (-)
XLOC_032818 NA non-coding downstream 448487 20563033 ~ 20564119 (-)
XLOC_032817 NA non-coding downstream 474437 20537799 ~ 20538169 (-)
XLOC_032816 NA non-coding downstream 519228 20492143 ~ 20493378 (-)
XLOC_032830 NA non-coding upstream 491456 21504503 ~ 21509039 (-)
XLOC_032842 NA non-coding upstream 1168215 22181262 ~ 22181876 (-)
XLOC_032844 BX537277.1 non-coding upstream 1527935 22540982 ~ 22541076 (-)

Expression



Co-expression Network