G1377482


Basic Information

Item Value
gene id G1377482
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 43692320 ~ 43692838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1573587
gtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaattctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagtatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaggctttaaacatcccaaggagcactgtgcaagcgacaatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaacagcagagatctacagttgaggtgggagactctgttcataggacatcaatcagtcgtatattgcac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1573587 True 519 TUCP 0.44 1 43692320 43692838

Neighbor

gene id symbol gene type direction distance location
LOC110492071 LOC106567135 coding downstream 93181 43578536 ~ 43599139 (-)
LOC110492069 LOC106567132 coding downstream 127878 43534694 ~ 43564442 (-)
LOC110492068 LOC106567131 coding downstream 188390 43497182 ~ 43503930 (-)
LOC110492067 klhl21 coding downstream 317055 43356495 ~ 43375265 (-)
nol9 nol9 coding downstream 344572 43340635 ~ 43347748 (-)
LOC110491064 cpsf3l coding upstream 20336 43713174 ~ 43718981 (-)
LOC118939539 NA coding upstream 33737 43726575 ~ 43733564 (-)
LOC110492074 LOC106567140 coding upstream 49457 43742295 ~ 43747314 (-)
LOC110492076 LOC106567144 coding upstream 129877 43822715 ~ 43828920 (-)
LOC110491066 LOC106567328 coding upstream 253646 43946484 ~ 43953965 (-)
G1377336 NA non-coding downstream 91870 43600101 ~ 43600450 (-)
G1377026 NA non-coding downstream 292117 43399575 ~ 43400203 (-)
G1377018 NA non-coding downstream 297445 43394482 ~ 43394875 (-)
G1377011 LOC100136012 non-coding downstream 302609 43389407 ~ 43389711 (-)
G1377491 NA non-coding upstream 11722 43704560 ~ 43724998 (-)
G1377508 NA non-coding upstream 32317 43725155 ~ 43725359 (-)
G1377516 NA non-coding upstream 47511 43740349 ~ 43740555 (-)
G1377535 NA non-coding upstream 80588 43773426 ~ 43774187 (-)
G1377543 NA non-coding upstream 98654 43791492 ~ 43791697 (-)
G1376991 NA other downstream 353765 43337162 ~ 43338555 (-)
LOC110492063 LOC106567124 other downstream 467937 43217803 ~ 43243705 (-)
G1376748 NA other downstream 522278 43159512 ~ 43170042 (-)
LOC110491060 LOC106567122 other downstream 568154 43117471 ~ 43124619 (-)
LOC110492059 LOC106567118 other downstream 919024 42767849 ~ 42773348 (-)
G1378530 NA other upstream 860176 44553014 ~ 44553547 (-)
plxna2 LOC106567158 other upstream 1225175 44621739 ~ 44964691 (-)
slc48a1a LOC106567162 other upstream 1623109 45315947 ~ 45320378 (-)
LOC110492109 LOC106567177 other upstream 1925379 45613938 ~ 45627786 (-)
G1380431 NA other upstream 2012272 45705110 ~ 45705453 (-)

Expression


Co-expression Network