Gene
RNA
| Item | Value |
|---|---|
| gene id | G1377554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 43810462 ~ 43810684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ZK1236.4, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1573665 | True | 223 | lncRNA | 0.52 | 1 | 43810462 | 43810684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492074 | LOC106567140 | coding | downstream | 63148 | 43742295 ~ 43747314 (-) |
| LOC118939539 | NA | coding | downstream | 76898 | 43726575 ~ 43733564 (-) |
| LOC110491064 | cpsf3l | coding | downstream | 91481 | 43713174 ~ 43718981 (-) |
| LOC110492072 | cenb5 | coding | downstream | 98128 | 43603093 ~ 43712334 (-) |
| LOC110492071 | LOC106567135 | coding | downstream | 211323 | 43578536 ~ 43599139 (-) |
| LOC110492076 | LOC106567144 | coding | upstream | 12031 | 43822715 ~ 43828920 (-) |
| LOC110491066 | LOC106567328 | coding | upstream | 135800 | 43946484 ~ 43953965 (-) |
| LOC110492081 | LOC106567146 | coding | upstream | 180680 | 43991364 ~ 43997840 (-) |
| LOC110492085 | ptn12 | coding | upstream | 619192 | 44429876 ~ 44449494 (-) |
| LOC110492087 | NA | coding | upstream | 650689 | 44461373 ~ 44465741 (-) |
| G1377545 | NA | non-coding | downstream | 14581 | 43794732 ~ 43795881 (-) |
| G1377543 | NA | non-coding | downstream | 18765 | 43791492 ~ 43791697 (-) |
| G1377535 | NA | non-coding | downstream | 36275 | 43773426 ~ 43774187 (-) |
| G1377516 | NA | non-coding | downstream | 69907 | 43740349 ~ 43740555 (-) |
| G1377508 | NA | non-coding | downstream | 85103 | 43725155 ~ 43725359 (-) |
| G1377540 | NA | non-coding | upstream | 10494 | 43821178 ~ 43821472 (-) |
| G1377578 | NA | non-coding | upstream | 31112 | 43841796 ~ 43842112 (-) |
| G1377601 | NA | non-coding | upstream | 45621 | 43856305 ~ 43856525 (-) |
| G1377605 | NA | non-coding | upstream | 47517 | 43858201 ~ 43858695 (-) |
| G1378199 | NA | non-coding | upstream | 128618 | 43939302 ~ 43982744 (-) |
| G1377482 | NA | other | downstream | 117624 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 471907 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 586079 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 640420 | 43159512 ~ 43170042 (-) |
| LOC110491060 | LOC106567122 | other | downstream | 686296 | 43117471 ~ 43124619 (-) |
| G1378530 | NA | other | upstream | 742330 | 44553014 ~ 44553547 (-) |
| plxna2 | LOC106567158 | other | upstream | 1107329 | 44621739 ~ 44964691 (-) |
| slc48a1a | LOC106567162 | other | upstream | 1505263 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 1807533 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 1894426 | 45705110 ~ 45705453 (-) |
