Gene
RNA
| Item | Value |
|---|---|
| gene id | G1377578 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 43841796 ~ 43842112 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1573693 | True | 317 | lncRNA | 0.35 | 1 | 43841796 | 43842112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492076 | LOC106567144 | coding | downstream | 12876 | 43822715 ~ 43828920 (-) |
| LOC110492074 | LOC106567140 | coding | downstream | 94482 | 43742295 ~ 43747314 (-) |
| LOC118939539 | NA | coding | downstream | 108232 | 43726575 ~ 43733564 (-) |
| LOC110491064 | cpsf3l | coding | downstream | 122815 | 43713174 ~ 43718981 (-) |
| LOC110492072 | cenb5 | coding | downstream | 129462 | 43603093 ~ 43712334 (-) |
| LOC110491066 | LOC106567328 | coding | upstream | 104372 | 43946484 ~ 43953965 (-) |
| LOC110492081 | LOC106567146 | coding | upstream | 149252 | 43991364 ~ 43997840 (-) |
| LOC110492085 | ptn12 | coding | upstream | 587764 | 44429876 ~ 44449494 (-) |
| LOC110492087 | NA | coding | upstream | 619261 | 44461373 ~ 44465741 (-) |
| LOC118939541 | NA | coding | upstream | 647150 | 44489262 ~ 44495268 (-) |
| G1377540 | NA | non-coding | downstream | 20324 | 43821178 ~ 43821472 (-) |
| G1377554 | NA | non-coding | downstream | 31112 | 43810462 ~ 43810684 (-) |
| G1377545 | NA | non-coding | downstream | 45915 | 43794732 ~ 43795881 (-) |
| G1377543 | NA | non-coding | downstream | 50099 | 43791492 ~ 43791697 (-) |
| G1377535 | NA | non-coding | downstream | 67609 | 43773426 ~ 43774187 (-) |
| G1377601 | NA | non-coding | upstream | 14193 | 43856305 ~ 43856525 (-) |
| G1377605 | NA | non-coding | upstream | 16089 | 43858201 ~ 43858695 (-) |
| G1378199 | NA | non-coding | upstream | 97190 | 43939302 ~ 43982744 (-) |
| G1378220 | NA | non-coding | upstream | 140828 | 43982940 ~ 43985022 (-) |
| G1378221 | NA | non-coding | upstream | 142999 | 43985111 ~ 43985349 (-) |
| G1377482 | NA | other | downstream | 148958 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 503241 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 617413 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 671754 | 43159512 ~ 43170042 (-) |
| LOC110491060 | LOC106567122 | other | downstream | 717630 | 43117471 ~ 43124619 (-) |
| G1378530 | NA | other | upstream | 710902 | 44553014 ~ 44553547 (-) |
| plxna2 | LOC106567158 | other | upstream | 1075901 | 44621739 ~ 44964691 (-) |
| slc48a1a | LOC106567162 | other | upstream | 1473835 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 1776105 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 1862998 | 45705110 ~ 45705453 (-) |
