Item | Value |
---|---|
gene id | G1377601 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 43856305 ~ 43856525 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1573717 | True | 221 | lncRNA | 0.43 | 1 | 43856305 | 43856525 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110492076 | LOC106567144 | coding | downstream | 27385 | 43822715 ~ 43828920 (-) |
LOC110492074 | LOC106567140 | coding | downstream | 108991 | 43742295 ~ 43747314 (-) |
LOC118939539 | NA | coding | downstream | 122741 | 43726575 ~ 43733564 (-) |
LOC110491064 | cpsf3l | coding | downstream | 137324 | 43713174 ~ 43718981 (-) |
LOC110492072 | cenb5 | coding | downstream | 143971 | 43603093 ~ 43712334 (-) |
LOC110491066 | LOC106567328 | coding | upstream | 89959 | 43946484 ~ 43953965 (-) |
LOC110492081 | LOC106567146 | coding | upstream | 134839 | 43991364 ~ 43997840 (-) |
LOC110492085 | ptn12 | coding | upstream | 573351 | 44429876 ~ 44449494 (-) |
LOC110492087 | NA | coding | upstream | 604848 | 44461373 ~ 44465741 (-) |
LOC118939541 | NA | coding | upstream | 632737 | 44489262 ~ 44495268 (-) |
G1377578 | NA | non-coding | downstream | 14193 | 43841796 ~ 43842112 (-) |
G1377540 | NA | non-coding | downstream | 34833 | 43821178 ~ 43821472 (-) |
G1377554 | NA | non-coding | downstream | 45621 | 43810462 ~ 43810684 (-) |
G1377545 | NA | non-coding | downstream | 60424 | 43794732 ~ 43795881 (-) |
G1377543 | NA | non-coding | downstream | 64608 | 43791492 ~ 43791697 (-) |
G1377605 | NA | non-coding | upstream | 1676 | 43858201 ~ 43858695 (-) |
G1378199 | NA | non-coding | upstream | 82777 | 43939302 ~ 43982744 (-) |
G1378220 | NA | non-coding | upstream | 126415 | 43982940 ~ 43985022 (-) |
G1378221 | NA | non-coding | upstream | 128586 | 43985111 ~ 43985349 (-) |
G1378222 | NA | non-coding | upstream | 129261 | 43985786 ~ 43986380 (-) |
G1377482 | NA | other | downstream | 163467 | 43692320 ~ 43692838 (-) |
G1376991 | NA | other | downstream | 517750 | 43337162 ~ 43338555 (-) |
LOC110492063 | LOC106567124 | other | downstream | 631922 | 43217803 ~ 43243705 (-) |
G1376748 | NA | other | downstream | 686263 | 43159512 ~ 43170042 (-) |
LOC110491060 | LOC106567122 | other | downstream | 732139 | 43117471 ~ 43124619 (-) |
G1378530 | NA | other | upstream | 696489 | 44553014 ~ 44553547 (-) |
plxna2 | LOC106567158 | other | upstream | 1061488 | 44621739 ~ 44964691 (-) |
slc48a1a | LOC106567162 | other | upstream | 1459422 | 45315947 ~ 45320378 (-) |
LOC110492109 | LOC106567177 | other | upstream | 1761692 | 45613938 ~ 45627786 (-) |
G1380431 | NA | other | upstream | 1848585 | 45705110 ~ 45705453 (-) |