Gene
RNA
| Item | Value |
|---|---|
| gene id | G1378221 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 43985111 ~ 43985349 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1574417 | True | 239 | lncRNA | 0.43 | 1 | 43985111 | 43985349 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491066 | LOC106567328 | coding | downstream | 31146 | 43946484 ~ 43953965 (-) |
| LOC110492076 | LOC106567144 | coding | downstream | 156191 | 43822715 ~ 43828920 (-) |
| LOC110492074 | LOC106567140 | coding | downstream | 237797 | 43742295 ~ 43747314 (-) |
| LOC118939539 | NA | coding | downstream | 251547 | 43726575 ~ 43733564 (-) |
| LOC110491064 | cpsf3l | coding | downstream | 266130 | 43713174 ~ 43718981 (-) |
| LOC110492081 | LOC106567146 | coding | upstream | 6015 | 43991364 ~ 43997840 (-) |
| LOC110492085 | ptn12 | coding | upstream | 444527 | 44429876 ~ 44449494 (-) |
| LOC110492087 | NA | coding | upstream | 476024 | 44461373 ~ 44465741 (-) |
| LOC118939541 | NA | coding | upstream | 503913 | 44489262 ~ 44495268 (-) |
| LOC110492088 | NA | coding | upstream | 553002 | 44538351 ~ 44540757 (-) |
| G1378220 | NA | non-coding | downstream | 89 | 43982940 ~ 43985022 (-) |
| G1378199 | NA | non-coding | downstream | 2367 | 43939302 ~ 43982744 (-) |
| G1377605 | NA | non-coding | downstream | 126416 | 43858201 ~ 43858695 (-) |
| G1377601 | NA | non-coding | downstream | 128586 | 43856305 ~ 43856525 (-) |
| G1377578 | NA | non-coding | downstream | 142999 | 43841796 ~ 43842112 (-) |
| G1378222 | NA | non-coding | upstream | 437 | 43985786 ~ 43986380 (-) |
| G1378317 | pss | non-coding | upstream | 204207 | 44189556 ~ 44190280 (-) |
| G1378346 | NA | non-coding | upstream | 219172 | 44204521 ~ 44204774 (-) |
| G1378353 | NA | non-coding | upstream | 233239 | 44218588 ~ 44218850 (-) |
| G1378355 | magi3 | non-coding | upstream | 237409 | 44222758 ~ 44224006 (-) |
| G1377482 | NA | other | downstream | 292273 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 646556 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 760728 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 815069 | 43159512 ~ 43170042 (-) |
| LOC110491060 | LOC106567122 | other | downstream | 860945 | 43117471 ~ 43124619 (-) |
| G1378530 | NA | other | upstream | 567665 | 44553014 ~ 44553547 (-) |
| plxna2 | LOC106567158 | other | upstream | 932664 | 44621739 ~ 44964691 (-) |
| slc48a1a | LOC106567162 | other | upstream | 1330598 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 1632868 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 1719761 | 45705110 ~ 45705453 (-) |
