G1378222


Basic Information

Item Value
gene id G1378222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 43985786 ~ 43986380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1574418
ATACCttcggcccagatgtttgtccgccgctgtcgtcgtacctggaggagagcccggtcggccctcctcaagaccacctccaggtatcgacgacAAGCGGATCGTCACCGGACCCCGGCTCCCCTGTATCGTTTCGGGCAGAAGGTATGATTGTCCATCCGGGATCTGTCTGTCCGGATGGAATCCCGCAAACTCTCCCCCTGGTTTATCGGTCCTTTTCCCATCTCCAAGGTCATTAGCCCCTTTActgtttgtcttctgttgccccgtaccctctGTATACATCCCACCTTCCATGTGTCAAGAGGGAAATCCATGTCTCACAGCCCGTTGTCTCCTGTTtcaatcttccccattatccccagtatATTTATACCTGTCTTCTCTATTTGTCTGTtaccagttcgttttgtttcatgAAACCTACCAGTGTTTGTTCCCCTGCTCCAGTCTGTTCTTGCCCCTGTTTTCTAGTCCTTctcggttttgaccattctgcctgccctgaccctgagcctgcctactTTTCTATACCTTTCCCCACCtcactggattactgacccctgcctgccctgaccctgagactgcctgcccc

Function

NR:

description
PREDICTED: fibroblast growth factor receptor-like 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1574418 True 595 lncRNA 0.53 1 43985786 43986380

Neighbor

gene id symbol gene type direction distance location
LOC110491066 LOC106567328 coding downstream 31821 43946484 ~ 43953965 (-)
LOC110492076 LOC106567144 coding downstream 156866 43822715 ~ 43828920 (-)
LOC110492074 LOC106567140 coding downstream 238472 43742295 ~ 43747314 (-)
LOC118939539 NA coding downstream 252222 43726575 ~ 43733564 (-)
LOC110491064 cpsf3l coding downstream 266805 43713174 ~ 43718981 (-)
LOC110492081 LOC106567146 coding upstream 4984 43991364 ~ 43997840 (-)
LOC110492085 ptn12 coding upstream 443496 44429876 ~ 44449494 (-)
LOC110492087 NA coding upstream 474993 44461373 ~ 44465741 (-)
LOC118939541 NA coding upstream 502882 44489262 ~ 44495268 (-)
LOC110492088 NA coding upstream 551971 44538351 ~ 44540757 (-)
G1378221 NA non-coding downstream 437 43985111 ~ 43985349 (-)
G1378220 NA non-coding downstream 764 43982940 ~ 43985022 (-)
G1378199 NA non-coding downstream 3042 43939302 ~ 43982744 (-)
G1377605 NA non-coding downstream 127091 43858201 ~ 43858695 (-)
G1377601 NA non-coding downstream 129261 43856305 ~ 43856525 (-)
G1378317 pss non-coding upstream 203176 44189556 ~ 44190280 (-)
G1378346 NA non-coding upstream 218141 44204521 ~ 44204774 (-)
G1378353 NA non-coding upstream 232208 44218588 ~ 44218850 (-)
G1378355 magi3 non-coding upstream 236378 44222758 ~ 44224006 (-)
G1378356 NA non-coding upstream 238056 44224436 ~ 44224669 (-)
G1377482 NA other downstream 292948 43692320 ~ 43692838 (-)
G1376991 NA other downstream 647231 43337162 ~ 43338555 (-)
LOC110492063 LOC106567124 other downstream 761403 43217803 ~ 43243705 (-)
G1376748 NA other downstream 815744 43159512 ~ 43170042 (-)
LOC110491060 LOC106567122 other downstream 861620 43117471 ~ 43124619 (-)
G1378530 NA other upstream 566634 44553014 ~ 44553547 (-)
plxna2 LOC106567158 other upstream 931633 44621739 ~ 44964691 (-)
slc48a1a LOC106567162 other upstream 1329567 45315947 ~ 45320378 (-)
LOC110492109 LOC106567177 other upstream 1631837 45613938 ~ 45627786 (-)
G1380431 NA other upstream 1718730 45705110 ~ 45705453 (-)

Expression


Co-expression Network