XLOC_032829


Basic Information

Item Value
gene id XLOC_032829
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 21496479 ~ 21498035 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064733
agggtgtaattgttaaaaataggtacaaacataagatataaacaaaaacctaaacaaacacttctatgtacataacgtcataaaaatacttgttttatttacctcgcgctgccgtccttgtactgccgtgaacaggaaattctgggaatggaggacggagagttgaatcgattcgtcttcaacaaaccgatcagtgtgacatcaaaacatcgcgagaacaacagacagctccgtgtgcatttgaatccatctcgcgatattgtatcacttcaggtacgcgcctactgattcgttgattcaaacgagttgtgaatcaagaagccttaagatccgaatcaaactgcagcagcacgccacgaggttttgctcagacttttgggacgtttggaattgctccgtcttgtcaccatgtaacacatagcagcaagacccatgggatttcatcagccactcaccatcagagtcctcagtggaagctgagaagagcagaagaggaagccaagcaagagatgccagaaaaaaagggggaaggaaataatgtgttatttagctgtttgagtataggcaggcgtagtgggtagcacaatcgcctcacagcaagaaggtcgctggttcgagcctcggctgggtcagttggcatttctgtgtggagtttgcatgttctccccatgttagcgtgggtttcctccgggtgctcccacaagtccaaaaatatgtggtgacattgggtaaggtaaaattgtccgtagtgtatgtgtgtgaatgagtatgtatggatgtttcccagtgatgggttgcagctgggtggcaacacggtggcacagtaggtagtgctgtttcctcacatcaagaaggt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064733 True 856 lncRNA 0.46 2 21496479 21498035

Neighbor

gene id symbol gene type direction distance location
XLOC_032828 cacng1a coding downstream 3727 21470261 ~ 21492752 (-)
XLOC_032827 obsl1a coding downstream 307184 21157195 ~ 21189295 (-)
XLOC_032826 inha coding downstream 404531 21068783 ~ 21091948 (-)
XLOC_032825 NA coding downstream 465771 21030441 ~ 21030708 (-)
XLOC_032824 NA coding downstream 483432 21012606 ~ 21013047 (-)
XLOC_032830 NA coding upstream 6468 21504503 ~ 21509039 (-)
XLOC_032831 cacng4a coding upstream 15328 21513363 ~ 21521755 (-)
XLOC_032832 psmd12 coding upstream 27508 21525543 ~ 21534301 (-)
XLOC_032833 si:dkey-43k4.3 coding upstream 78129 21576164 ~ 21582638 (-)
XLOC_032834 ppp1r12c coding upstream 90170 21588205 ~ 21616659 (-)
XLOC_032820 LO018113.1 non-coding downstream 849146 20647227 ~ 20647333 (-)
XLOC_032819 NA non-coding downstream 883297 20610192 ~ 20613182 (-)
XLOC_032818 NA non-coding downstream 932360 20563033 ~ 20564119 (-)
XLOC_032842 NA non-coding upstream 683227 22181262 ~ 22181876 (-)
XLOC_032844 BX537277.1 non-coding upstream 1042947 22540982 ~ 22541076 (-)
XLOC_032846 NA non-coding upstream 1520018 23018053 ~ 23018480 (-)
XLOC_032848 NA non-coding upstream 1712516 23210551 ~ 23214794 (-)

Expression


Co-expression Network