Gene
RNA
| Item | Value |
|---|---|
| gene id | G1378353 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 44218588 ~ 44218850 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC108877958 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1574555 | True | 263 | lncRNA | 0.51 | 1 | 44218588 | 44218850 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492081 | LOC106567146 | coding | downstream | 220748 | 43991364 ~ 43997840 (-) |
| LOC110491066 | LOC106567328 | coding | downstream | 264623 | 43946484 ~ 43953965 (-) |
| LOC110492076 | LOC106567144 | coding | downstream | 389668 | 43822715 ~ 43828920 (-) |
| LOC110492074 | LOC106567140 | coding | downstream | 471274 | 43742295 ~ 43747314 (-) |
| LOC118939539 | NA | coding | downstream | 485024 | 43726575 ~ 43733564 (-) |
| LOC110492085 | ptn12 | coding | upstream | 211026 | 44429876 ~ 44449494 (-) |
| LOC110492087 | NA | coding | upstream | 242523 | 44461373 ~ 44465741 (-) |
| LOC118939541 | NA | coding | upstream | 270412 | 44489262 ~ 44495268 (-) |
| LOC110492088 | NA | coding | upstream | 319501 | 44538351 ~ 44540757 (-) |
| cd34a | cd34a | coding | upstream | 341351 | 44560201 ~ 44596213 (-) |
| G1378346 | NA | non-coding | downstream | 13814 | 44204521 ~ 44204774 (-) |
| G1378317 | pss | non-coding | downstream | 28308 | 44189556 ~ 44190280 (-) |
| G1378222 | NA | non-coding | downstream | 232208 | 43985786 ~ 43986380 (-) |
| G1378221 | NA | non-coding | downstream | 233239 | 43985111 ~ 43985349 (-) |
| G1378220 | NA | non-coding | downstream | 233566 | 43982940 ~ 43985022 (-) |
| G1378355 | magi3 | non-coding | upstream | 3908 | 44222758 ~ 44224006 (-) |
| G1378356 | NA | non-coding | upstream | 5586 | 44224436 ~ 44224669 (-) |
| G1378361 | NA | non-coding | upstream | 12975 | 44231825 ~ 44232053 (-) |
| G1378363 | NA | non-coding | upstream | 15306 | 44234156 ~ 44234383 (-) |
| G1378365 | NA | non-coding | upstream | 18279 | 44237129 ~ 44237418 (-) |
| G1377482 | NA | other | downstream | 525750 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 880033 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 994205 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 1048546 | 43159512 ~ 43170042 (-) |
| LOC110491060 | LOC106567122 | other | downstream | 1094422 | 43117471 ~ 43124619 (-) |
| G1378530 | NA | other | upstream | 334164 | 44553014 ~ 44553547 (-) |
| plxna2 | LOC106567158 | other | upstream | 699163 | 44621739 ~ 44964691 (-) |
| slc48a1a | LOC106567162 | other | upstream | 1097097 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 1399367 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 1486260 | 45705110 ~ 45705453 (-) |
