Gene
RNA
| Item | Value |
|---|---|
| gene id | G1378468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 44385186 ~ 44467625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C4b-binding protein alpha chain isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1574678 | True | 519 | lncRNA | 0.45 | 2 | 44385186 | 44467625 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492081 | LOC106567146 | coding | downstream | 387346 | 43991364 ~ 43997840 (-) |
| LOC110491066 | LOC106567328 | coding | downstream | 431221 | 43946484 ~ 43953965 (-) |
| LOC110492076 | LOC106567144 | coding | downstream | 556266 | 43822715 ~ 43828920 (-) |
| LOC110492074 | LOC106567140 | coding | downstream | 637872 | 43742295 ~ 43747314 (-) |
| LOC118939539 | NA | coding | downstream | 651622 | 43726575 ~ 43733564 (-) |
| LOC118939541 | NA | coding | upstream | 21637 | 44489262 ~ 44495268 (-) |
| LOC110492088 | NA | coding | upstream | 70726 | 44538351 ~ 44540757 (-) |
| cd34a | cd34a | coding | upstream | 92576 | 44560201 ~ 44596213 (-) |
| plxna2 | LOC106567158 | coding | upstream | 154114 | 44621739 ~ 44964691 (-) |
| LOC110492092 | LOC106567333 | coding | upstream | 836095 | 45303720 ~ 45307537 (-) |
| G1378481 | NA | non-coding | downstream | 8677 | 44376178 ~ 44376509 (-) |
| G1378476 | NA | non-coding | downstream | 12876 | 44372048 ~ 44372310 (-) |
| G1378475 | NA | non-coding | downstream | 13875 | 44371083 ~ 44371311 (-) |
| G1378474 | NA | non-coding | downstream | 16033 | 44368934 ~ 44369153 (-) |
| G1378473 | NA | non-coding | downstream | 16734 | 44368209 ~ 44368452 (-) |
| G1378454 | NA | non-coding | upstream | 45928 | 44513553 ~ 44515545 (-) |
| G1378470 | NA | non-coding | upstream | 53961 | 44521586 ~ 44522883 (-) |
| G1378469 | NA | non-coding | upstream | 66749 | 44534374 ~ 44535502 (-) |
| G1378466 | NA | non-coding | upstream | 67995 | 44535620 ~ 44536570 (-) |
| G1377482 | NA | other | downstream | 692348 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 1046631 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 1160803 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 1215144 | 43159512 ~ 43170042 (-) |
| LOC110491060 | LOC106567122 | other | downstream | 1261020 | 43117471 ~ 43124619 (-) |
| G1378530 | NA | other | upstream | 85389 | 44553014 ~ 44553547 (-) |
| slc48a1a | LOC106567162 | other | upstream | 848322 | 45315947 ~ 45320378 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 1150592 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 1237485 | 45705110 ~ 45705453 (-) |
